Evidence map›Paper›PMID 38128123›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA2024

CODA: an open-source platform for federated analysis and machine learning on distributed healthcare data.

Louis Mullie, Jonathan Afilalo, Patrick Archambault, Rima Bouchakri, Kip Brown, David L Buckeridge, Yiorgos Alexandros Cavayas, Alexis F Turgeon, Denis Martineau, François Lamontagne and 8 more

Abstract read
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Real-world federated learning in radiology: hurdles to overcome and benefits to gain.Journal of the American Medical Informatics Association : JAMIA · 2025
    Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Louis MullieDepartment of Medicine, Centre Hospitalier de l'Université de Montréal, Montréal, H2X 3E4, Canada.ORCID 0000-0001-8668-675X
Jonathan AfilaloDepartment of Medicine, Jewish General Hospital, Montréal, H3T 1E4, Canada.ORCID 0000-0003-0555-4937
Patrick ArchambaultDepartment of Emergency Medicine and Family Medicine, Université Laval, Québec, G1V 0A6, Canada.
Rima BouchakriCentre de Recherche du Centre Hospitalier de l'Université de Montréal, Université de Montréal, Montréal, H2X 0A9, Canada.
Kip BrownCentre de Recherche du Centre Hospitalier de l'Université de Montréal, Université de Montréal, Montréal, H2X 0A9, Canada.
David L BuckeridgeMila Quebec Artificial Intelligence Institute, Montréal, H2S 3H1, Canada.ORCID 0000-0003-1817-5047
Yiorgos Alexandros CavayasDepartment of Medicine, Hôpital du Sacré-Coeur de Montréal, Montréal, H4J 1C5, Canada.
Alexis F TurgeonDepartment of Anesthesiology and Critical Care Medicine, Université Laval, Québec, G1V 0A6, Canada.
Denis MartineauCentre de recherche du CHU de Québec-Université Laval, Université Laval, Québec, G1V 4G2, Canada.
François LamontagneCentre de recherche du CHUS, Centre Hospitalier Universitaire de Sherbrooke, Sherbrooke, J1G 2E8, Canada.
Martine LebrasseurCentre de Recherche du Centre Hospitalier de l'Université de Montréal, Université de Montréal, Montréal, H2X 0A9, Canada.
Renald LemieuxCentre de recherche du CHUS, Centre Hospitalier Universitaire de Sherbrooke, Sherbrooke, J1G 2E8, Canada.
Jeffrey LiCentre de Recherche du Centre Hospitalier de l'Université de Montréal, Université de Montréal, Montréal, H2X 0A9, Canada.
Michaël SauthierFaculty of Medicine, Université de Montréal, Montréal, H3C 3J7, Canada.
Pascal St-OngeCentre de Recherche du Centre Hospitalier de l'Université de Montréal, Université de Montréal, Montréal, H2X 0A9, Canada.
An TangFaculty of Medicine, Université de Montréal, Montréal, H3C 3J7, Canada.
William WittemanCentre de Recherche Intégré pour un Système Apprenant en santé et Services Sociaux, Centre intégré de santé et de Services Sociaux de Chaudière-Appalaches, Lévis, G6V 3Z1, Canada.
Michaël ChasséDepartment of Medicine, Centre Hospitalier de l'Université de Montréal, Montréal, H2X 3E4, Canada.

Funding

CIHR #172742CIHR 172742
6 · The paper itself

Abstract

objectivesDistributed computations facilitate multi-institutional data analysis while avoiding the costs and complexity of data pooling. Existing approaches lack crucial features, such as built-in medical standards and terminologies, no-code data visualizations, explicit disclosure control mechanisms, and support for basic statistical computations, in addition to gradient-based optimization capabilities. MATERIALS AND

methodsWe describe the development of the Collaborative Data Analysis (CODA) platform, and the design choices undertaken to address the key needs identified during our survey of stakeholders. We use a public dataset (MIMIC-IV) to demonstrate end-to-end multi-modal FL using CODA. We assessed the technical feasibility of deploying the CODA platform at 9 hospitals in Canada, describe implementation challenges, and evaluate its scalability on large patient populations.

resultsThe CODA platform was designed, developed, and deployed between January 2020 and January 2023. Software code, documentation, and technical documents were released under an open-source license. Multi-modal federated averaging is illustrated using the MIMIC-IV and MIMIC-CXR datasets. To date, 8 out of the 9 participating sites have successfully deployed the platform, with a total enrolment of >1M patients. Mapping data from legacy systems to FHIR was the biggest barrier to implementation. DISCUSSION AND

conclusionThe CODA platform was developed and successfully deployed in a public healthcare setting in Canada, with heterogeneous information technology systems and capabilities. Ongoing efforts will use the platform to develop and prospectively validate models for risk assessment, proactive monitoring, and resource usage. Further work will also make tools available to facilitate migration from legacy formats to FHIR and DICOM.

Indexed as

Health FacilitiesSoftwareCanadaDelivery of Health CareHumansMachine Learningbiomedical analyticsdistributed computingfederated learninghealthcare data managementmachine learningpredictive modelsresource usage analysis

Identifiers

PMID38128123
PMCPMC10873779

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.