Evidence map›Paper›PMID 38126976›Full record

ArticleAging2023

ATRX is a predictive marker for endocrinotherapy and chemotherapy resistance in HER2-/HR+ breast cancer through the regulation of the AR, GLI3 and GATA2 transcriptional network.

Hongyan Qian, Rui Ji, Cheng Shen, Yinze Wei, Chenyi Sheng, Qichao Ni, Jing Pan, Yifan Chi, Huan You, Ying Miao and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Aging, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 2 citations in OpenAlex.

  1. The emerging roles of disulfidptosis in cancer.Apoptosis : an international journal on programmed cell death · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Hongyan QianCancer Research Center Nantong, Nantong Tumor Hospital, Affiliated Tumor Hospital of Nantong University, Nantong 226361, China.
Rui JiDepartment of Gynecology Oncology, Nantong Tumor Hospital, Affiliated Tumor Hospital of Nantong University, Nantong 226361, China.
Cheng ShenDepartment of Computer Science and Engineering, Tandon School of Engineering, New York University, Brooklyn, NY 11201, USA.
Yinze WeiDepartment of Pathology, Affiliated Tumor Hospital of Nantong University, Nantong 226361, China.
Chenyi ShengDepartment of Breast Surgery, Affiliated Hospital of Nantong University, Nantong 226001, China.
Qichao NiDepartment of Breast Surgery, Affiliated Hospital of Nantong University, Nantong 226001, China.
Jing PanSchool of Medicine, Nantong University, Nantong 226001, China.
Yifan ChiSchool of Medicine, Nantong University, Nantong 226001, China.
Huan YouSchool of Medicine, Nantong University, Nantong 226001, China.
Ying MiaoSchool of Medicine, Nantong University, Nantong 226001, China.
Minxin ShiDepartment of Surgery, Affiliated Tumor Hospital of Nantong University, Nantong 226361, China.
Xianghua HuangDepartment of Surgery, Affiliated Tumor Hospital of Nantong University, Nantong 226361, China.
Aiguo ShenCancer Research Center Nantong, Nantong Tumor Hospital, Affiliated Tumor Hospital of Nantong University, Nantong 226361, China.
Nantong University · CNAffiliated Hospital of Nantong University · CNNantong Tumor Hospital · CNNew York University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drug resistance in breast cancer (BC) is a clinical challenge. Exploring the mechanism and identifying a precise predictive biomarker for the drug resistance in BC is critical. Three first-line drug (paclitaxel, doxorubicin and tamoxifen) resistance datasets in BC from GEO were merged to obtain 1,461 differentially expressed genes for weighted correlation network analysis, resulting in identifying ATRX as the hub gene. ATRX is a chromatin remodelling protein, therefore, ATRX-associated transcription factors were explored, thereby identifying the network of AR, GLI3 and GATA2. GO and KEGG analyses revealed immunity, transcriptional regulation and endocrinotherapy/chemotherapy resistance were enriched. Moreover, CIBERSORT revealed immunity regulation was inhibited in the resistance group. ssGSEA showed a significantly lower immune status in the ATRX-Low group compared to the ATRX-High group. Furthermore, the peaks of H3K9me3 ChIP-seq on the four genes were higher in normal tissues than in BC tissues. Notably, the frequency of ATRX mutation was higher than BRCA in BC. Moreover, depressed ATRX revealed worse overall survival and disease-free survival in the human epidermal growth factor receptor 2 (HER2)-/hormone receptor (HR)+ BC. Additionally, depressed ATRX predicted poor results for patients who underwent endocrinotherapy or chemotherapy in the HER2-/HR+ BC subgroup. A nomogram based on ATRX, TILs and ER exhibited a significantly accurate survival prediction ability. Importantly, overexpression of ATRX significantly inhibited the IC

Indexed as

Breast NeoplasmsDrug Resistance, NeoplasmX-linked Nuclear ProteinDoxorubicinErb-b2 Receptor Tyrosine KinasesFemaleGATA2 Transcription FactorGene Regulatory NetworksHumansNerve Tissue ProteinsPaclitaxelReceptors, AndrogenTamoxifenZinc Finger Protein Gli3ATRX protein, humanDoxorubicinErb-b2 Receptor Tyrosine KinasesGATA2 protein, humanGATA2 Transcription FactorGLI3 protein, humanNerve Tissue ProteinsPaclitaxelReceptors, AndrogenTamoxifenX-linked Nuclear ProteinZinc Finger Protein Gli3ATRXbiomarkerbreast cancerdrug resistancetranscription factor

Identifiers

PMID38126976
PMCPMC10781474
OpenAlexW4389992633

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.