Evidence map›Paper›PMID 38125428›Full record

ArticleHeliyon2023

Application of serum peptidomics for Parkinson's disease in SNCA-A30P mice.

Zi Yin, Guangqiong Xu, Yue Qi, Dong-Ming Tan, Er-Hua Chen, Xu Ding, Run-Yuan Ji

Open access · goldAbstract read
In one paragraph

Article in Heliyon, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Zi YinDepartment of Pharmacology, School of Medicine& Holistic Integrative Medicine, Nanjing University of Chinese Medicine, NanJing, 210023, Jiangsu, China.
Guangqiong XuSchool of Pharmaceutical Engineering, Jiangsu Food & Pharmaceutical Science College, Huaian, 223023, Jiangsu, China.
Yue QiDepartment of Pharmaceutical Technology, Jiangsu Provincial XuZhou Pharamceutical Vocational College, XuZhou, 221000, Jiangsu, China.
Dong-Ming TanCollege of Pharmacy and Traditional Chinese Medicine, Jiangsu College of Nursing, Huaian, 223003, Jiangsu, China.
Er-Hua ChenCollege of Pharmacy and Traditional Chinese Medicine, Jiangsu College of Nursing, Huaian, 223003, Jiangsu, China.
Xu DingCollege of Pharmacy and Traditional Chinese Medicine, Jiangsu College of Nursing, Huaian, 223003, Jiangsu, China.
Run-Yuan JiDepartment of Analytical & Testing Center, School of Basic Medical, Nanjing Medical University, Nanjing, Jiangsu, Nanjing, Jiangsu, China.
Jiangsu Food and Pharmaceutical Science College · CNNanjing Medical University · CNNanjing University of Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intraneuronal inclusions of alpha-synuclein (α-synuclein, α-syn) are commonly found in the brain of patients with Parkinson's disease (PD). The pathogenesis of the abundant α-syn protein in the blood has been extensively studied to understand its properties better. In recent years, peptidome analysis has received increasing attention. In this study, we identified and analyzed serum peptides from wild-type (WT) and the (Thy-1)-h[A30P] alpha-synuclein transgenic mice (SNCA-A30P mice) using liquid chromatography-tandem mass spectrometry (LC-MS/MS). One thousand eight hundred fifty-six peptides from 771 proteins were analyzed. Among them, 151 peptides from 107 proteins were significantly differentially expressed. The glycoprotein VI platelet pathway (GP6) was the pathway's most significant differentially expressed signaling pathway. Cleavage sites of the differentially expressed peptides may reflect protease distribution and activity. We selected the most significantly differentially expressed peptide, VGGDPI, and found that it contained cathepsin K (Ctsk) and trypsin-1 cleavage sites, suggesting that Ctsk and trypsin-1 may be key peptidases in PD. α-syn is a protein associated with the pathogenesis of PD. mutations in several genes, including SNCA, which encodes α-syn, are associated with the development of PD. Bioinformatics analysis of the physiological pathways related to SNCA genes and apoptosis genes found the five most markedly up-regulated proteins: formin homology 2 domain-containing 1 (FHOD1), insulin receptor substrate 1(IRS1), TRPM8 channel-associated factor 1 (TCAF1), glyceraldehyde 3-phosphate dehydrogenase (GAPDH), and interleukin-16 (IL-16). Therefore, the differentially expressed peptides in the five precursor protein domains may be potential bioactive peptides associated with α-syn and apoptosis. This study provides a validated peptidomics profile of SNCA-A30P mice and identifies potentially bioactive peptides linked to α-syn and apoptosis.

Indexed as

Alpha-synucleinBloodLC-MS/MSParkinson's diseasePeptidomicsSNCA-A30P

Identifiers

PMID38125428
PMCPMC10730432
OpenAlexW4388666195

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.