Evidence map›Paper›PMID 38124734›Full record

ArticleFrontiers in immunology2023

Multivariate analysis of FcR-mediated NK cell functions identifies unique clustering among humans and rhesus macaques.

Marina Tuyishime, Rachel L Spreng, Brady Hueber, Junsuke Nohara, Derrick Goodman, Cliburn Chan, Richard Barfield, Whitney E Beck, Shalini Jha, Stephanie Asdell and 16 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 5 institutions in 1 country.

Marina Tuyishime *Department of Surgery, Duke University, Durham, NC, United States.
Rachel L Spreng *Duke Human Vaccine Institute, Durham, NC, United States.
Brady HueberCenter for Human Systems Immunology, Durham, NC, United States.
Junsuke NoharaDepartment of Surgery, Duke University, Durham, NC, United States.
Derrick GoodmanDepartment of Surgery, Duke University, Durham, NC, United States.
Cliburn ChanCenter for Human Systems Immunology, Durham, NC, United States.
Richard BarfieldCenter for Human Systems Immunology, Durham, NC, United States.
Whitney E BeckDepartment of Surgery, Duke University, Durham, NC, United States.
Shalini JhaDepartment of Surgery, Duke University, Durham, NC, United States.
Stephanie AsdellDepartment of Surgery, Duke University, Durham, NC, United States.
Kevin WieheDuke Human Vaccine Institute, Durham, NC, United States.
Max M HeDuke Human Vaccine Institute, Durham, NC, United States.
David EasterhoffDuke Human Vaccine Institute, Durham, NC, United States.
Haleigh E ConleyDuke Human Vaccine Institute, Durham, NC, United States.
Taylor HoxieDuke Human Vaccine Institute, Durham, NC, United States.
Thaddeus GurleyDuke Human Vaccine Institute, Durham, NC, United States.
Caroline JonesDuke Human Vaccine Institute, Durham, NC, United States.
Nihar Deb AdhikaryNew Iberia Research Center, University of Louisiana at Lafayette, New Iberia, LA, United States.
Francois VillingerNew Iberia Research Center, University of Louisiana at Lafayette, New Iberia, LA, United States.
Rasmi ThomasU.S. Military HIV Research Program, Walter Reed Army Institute of Research, Silver Spring, MD, United States.
Thomas N DennyDuke Human Vaccine Institute, Durham, NC, United States.
Michael Anthony MoodyDuke Human Vaccine Institute, Durham, NC, United States.
Georgia D TomarasDepartment of Surgery, Duke University, Durham, NC, United States.
Justin Pollara *Department of Surgery, Duke University, Durham, NC, United States.
R Keith Reeves *Department of Surgery, Duke University, Durham, NC, United States.
Guido Ferrari *Department of Surgery, Duke University, Durham, NC, United States.
Duke University · USCenter for Human Genetics · USUniversity of Louisiana at Lafayette · USBeth Israel Deaconess Medical Center · USWalter Reed Army Institute of Research · US

Funding

Support for QA/QC for Prior Approval ProcessUL1TR002553 · NCATS · DUKE UNIVERSITY · PI LI, JENNIFER S, MCNAMARA, JAMES O. · 2018 to 2023
$58.5M
Social and Behavioral Sciences CoreP30AI064518 · NIAID · DUKE UNIVERSITY · PI Nwora Lance Okeke · 2005 to 2026
$50.5M
Virus and Antibody Gene Sequencing CoreP01AI131251 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI Kevin Wiehe · 2017 to 2026
$40.7M
Structure-Function Analytics CoreP01AI162242 · NIAID · DUKE UNIVERSITY · PI TOMARAS, GEORGIA DORIS · 2021 to 2025
$22.2M
Physical Resources CoreP01AI120756 · NIAID · DUKE UNIVERSITY · PI TOMARAS, GEORGIA DORIS · 2016 to 2020
$17.1M
Ruth L. Kirschstein National Research Service Award (NRSA)- T32T32AI007392 · NIAID · DUKE UNIVERSITY · PI Amy Lynn Corneli, Guido Ferrari · 1990 to 2026
$9.8M
Mechanisms of Natural Killer Cell Clearance of SIV from Lymphoid FolliclesR01AI143457 · NIAID · DUKE UNIVERSITY · PI REEVES, ROGER KEITH · 2019 to 2023
$3.1M
NCATS NIH HHS UL1 TR002553NIAID NIH HHS P01 AI120756NIAID NIH HHS P01 AI131251NIAID NIH HHS P01 AI162242NIAID NIH HHS P30 AI064518NIAID NIH HHS R01 AI143457NIAID NIH HHS T32 AI007392
6 · The paper itself

Abstract

Rhesus macaques (RMs) are a common pre-clinical model used to test HIV vaccine efficacy and passive immunization strategies. Yet, it remains unclear to what extent the Fc-Fc receptor (FcR) interactions impacting antiviral activities of antibodies in RMs recapitulate those in humans. Here, we evaluated the FcR-related functionality of natural killer cells (NKs) from peripheral blood of uninfected humans and RMs to identify intra- and inter-species variation. NKs were screened for FcγRIIIa (human) and FcγRIII (RM) genotypes (FcγRIII(a)), receptor signaling, and antibody-dependent cellular cytotoxicity (ADCC), the latter mediated by a cocktail of monoclonal IgG1 antibodies with human or RM Fc. FcγRIII(a) genetic polymorphisms alone did not explain differences in NK effector functionality in either species cohort. Using the same parameters, hierarchical clustering separated each species into two clusters. Importantly, in principal components analyses, ADCC magnitude, NK contribution to ADCC, FcγRIII(a) cell-surface expression, and frequency of phosphorylated CD3ζ NK cells all contributed similarly to the first principal component within each species, demonstrating the importance of measuring multiple facets of NK cell function. Although ADCC potency was similar between species, we detected significant differences in frequencies of NK cells and pCD3ζ+ cells, level of cell-surface FcγRIII(a) expression, and NK-mediated ADCC (P<0.001), indicating that a combination of Fc-FcR parameters contribute to overall inter-species functional differences. These data strongly support the importance of multi-parameter analyses of Fc-FcR NK-mediated functions when evaluating efficacy of passive and active immunizations in pre- and clinical trials and identifying correlates of protection. The results also suggest that pre-screening animals for multiple FcR-mediated NK function would ensure even distribution of animals among treatment groups in future preclinical trials.

Indexed as

Antibodies, MonoclonalReceptors, FcAnimalsCluster AnalysisHumansKiller Cells, NaturalMacaca mulattaMultivariate AnalysisAntibodies, MonoclonalReceptors, FcADCCantibodyFc gamma receptorFcR-mediated effector functionsNK cellsprincipal component analysisrhesus macaques

Identifiers

PMID38124734
PMCPMC10732150
OpenAlexW4389399667

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.