Evidence map›Paper›PMID 38124296›Full record

ArticlePlant biotechnology journal2024

A transient expression tool box for anthocyanin biosynthesis in Nicotiana benthamiana.

Ramona Grützner, Kristin König, Claudia Horn, Carola Engler, Annegret Laub, Thomas Vogt, Sylvestre Marillonnet

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Advances and opportunities for computational interrogation of plant proteins.The Plant journal : for cell and molecular biology · 2026
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  6. Metabolic engineering inaBIOTECH · 2025
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  8. The Light-RegulatedInternational journal of molecular sciences · 2025
    Article
  9. Review
  10. High-quality genome of black wolfberry (Horticulture research · 2025
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ramona GrütznerDepartment of Cell and Metabolic Biology, Leibniz Institute of Plant Biochemistry, Halle, Germany.
Kristin KönigDepartment of Cell and Metabolic Biology, Leibniz Institute of Plant Biochemistry, Halle, Germany.
Claudia HornDepartment of Cell and Metabolic Biology, Leibniz Institute of Plant Biochemistry, Halle, Germany.
Carola EnglerIcon Genetics, Biozentrum Halle, Halle/Saale, Germany.
Annegret LaubDepartment of Bioorganic Chemistry, Leibniz Institute of Plant Biochemistry, Halle, Germany.
Thomas VogtDepartment of Cell and Metabolic Biology, Leibniz Institute of Plant Biochemistry, Halle, Germany.
Sylvestre MarillonnetDepartment of Cell and Metabolic Biology, Leibniz Institute of Plant Biochemistry, Halle, Germany.ORCID 0000-0002-4263-797X
Leibniz Institute of Plant Biochemistry · DEBioSolutions Halle (Germany) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transient expression in Nicotiana benthamiana offers a robust platform for the rapid production of complex secondary metabolites. It has proven highly effective in helping identify genes associated with pathways responsible for synthesizing various valuable natural compounds. While this approach has seen considerable success, it has yet to be applied to uncovering genes involved in anthocyanin biosynthetic pathways. This is because only a single anthocyanin, delphinidin 3-O-rutinoside, can be produced in N. benthamiana by activation of anthocyanin biosynthesis using transcription factors. The production of other anthocyanins would necessitate the suppression of certain endogenous flavonoid biosynthesis genes while transiently expressing others. In this work, we present a series of tools for the reconstitution of anthocyanin biosynthetic pathways in N. benthamiana leaves. These tools include constructs for the expression or silencing of anthocyanin biosynthetic genes and a mutant N. benthamiana line generated using CRISPR. By infiltration of defined sets of constructs, the basic anthocyanins pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside and delphinidin 3-O-glucoside could be obtained in high amounts in a few days. Additionally, co-infiltration of supplementary pathway genes enabled the synthesis of more complex anthocyanins. These tools should be useful to identify genes involved in the biosynthesis of complex anthocyanins. They also make it possible to produce novel anthocyanins not found in nature. As an example, we reconstituted the pathway for biosynthesis of Arabidopsis anthocyanin A5, a cyanidin derivative and achieved the biosynthesis of the pelargonidin and delphinidin variants of A5, pelargonidin A5 and delphinidin A5.

Indexed as

AnthocyaninsNicotianaGene Expression Regulation, PlantGlucosidesTranscription FactorsAnthocyaninsGlucosidesTranscription Factorsanthocyaninsbiosynthetic pathwayNicotiana benthamianaplant biotechnologysynthetic biologytransient expression

Identifiers

PMID38124296
PMCPMC11022804
OpenAlexW4390055536

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.