Evidence map›Paper›PMID 38123357›Full record

ArticleBMJ health & care informatics2023

Exploring the reliability of inpatient EMR algorithms for diabetes identification.

Seungwon Lee, Elliot A Martin, Jie Pan, Cathy A Eastwood, Danielle A Southern, David J T Campbell, Abdel Aziz Shaheen, Hude Quan, Sonia Butalia

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Article in BMJ health & care informatics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Observational
  2. Article
  3. Article
  4. Automated sample annotation for diabetes mellitus in healthcare integrated biobanking.Computational and structural biotechnology journal · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Seungwon LeeCommunity Health Sciences, University of Calgary Cumming School of Medicine, Calgary, Alberta, Canada seungwon.lee@ucalgary.ca.ORCID http://orcid.org/0000-0002-6532-5303
Elliot A MartinCommunity Health Sciences, University of Calgary Cumming School of Medicine, Calgary, Alberta, Canada.
Jie PanCommunity Health Sciences, University of Calgary Cumming School of Medicine, Calgary, Alberta, Canada.
Cathy A EastwoodCommunity Health Sciences, University of Calgary Cumming School of Medicine, Calgary, Alberta, Canada.
Danielle A SouthernCentre for Health Informatics, University of Calgary Cumming School of Medicine, Calgary, Alberta, Canada.ORCID http://orcid.org/0000-0002-0006-0033
David J T CampbellCommunity Health Sciences, University of Calgary Cumming School of Medicine, Calgary, Alberta, Canada.
Abdel Aziz ShaheenCommunity Health Sciences, University of Calgary Cumming School of Medicine, Calgary, Alberta, Canada.
Hude QuanCommunity Health Sciences, University of Calgary Cumming School of Medicine, Calgary, Alberta, Canada.
Sonia ButaliaCommunity Health Sciences, University of Calgary Cumming School of Medicine, Calgary, Alberta, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionAccurate identification of medical conditions within a real-time inpatient setting is crucial for health systems. Current inpatient comorbidity algorithms rely on integrating various sources of administrative data, but at times, there is a considerable lag in obtaining and linking these data. Our study objective was to develop electronic medical records (EMR) data-based inpatient diabetes phenotyping algorithms. MATERIALS AND

methodsA chart review on 3040 individuals was completed, and 583 had diabetes. We linked EMR data on these individuals to the International Classification of Disease (ICD) administrative databases. The following EMR-data-based diabetes algorithms were developed: (1) laboratory data, (2) medication data, (3) laboratory and medications data, (4) diabetes concept keywords and (5) diabetes free-text algorithm. Combined algorithms used

resultsThe algorithms tested generally performed well: ICD-coded data, SN 0.84, specificity (SP) 0.98, PPV 0.93 and negative predictive value (NPV) 0.96; medication and laboratory algorithm, SN 0.90, SP 0.95, PPV 0.80 and NPV 0.97; all document types algorithm, SN 0.95, SP 0.98, PPV 0.94 and NPV 0.99. DISCUSSION: Free-text data-based diabetes algorithm can yield comparable or superior performance to a commonly used ICD-coded algorithm and could supplement existing methods. These types of inpatient EMR-based algorithms for case identification may become a key method for timely resource planning and care delivery.

Indexed as

Diabetes MellitusElectronic Health RecordsAlgorithmsHumansInpatientsReproducibility of Resultselectronic health recordshealth services researchmedical informaticsmedical record linkage

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.