Evidence map›Paper›PMID 38117184›Full record

ArticleCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology2024

The Salivary Microbiome and Predicted Metabolite Production Are Associated with Barrett's Esophagus and High-Grade Dysplasia or Adenocarcinoma.

Quinn S Solfisburg, Federico Baldini, Brittany Baldwin-Hunter, George I Austin, Harry H Lee, Heekuk Park, Daniel E Freedberg, Charles J Lightdale, Tal Korem, Julian A Abrams

Open access · greenAbstract read
In one paragraph

Article in Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. The Microbiome and Esophageal Disease: Where Are We Now?Current gastroenterology reports · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Pathogenesis of Barrett's Esophagus: Evolving and Emerging Mechanisms.Gastrointestinal endoscopy clinics of North America · 2026
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Quinn S SolfisburgDepartment of Medicine, Boston University School of Medicine, Boston, Massachusetts.ORCID 0000-0001-6923-1585
Federico BaldiniProgram for Mathematical Genomics, Department of Systems Biology, Columbia University Irving Medical Center, New York, New York.ORCID 0000-0001-9079-8869
Brittany Baldwin-HunterDepartment of Medicine, Columbia University Irving Medical Center, New York, New York.ORCID 0000-0003-2035-4386
George I AustinProgram for Mathematical Genomics, Department of Systems Biology, Columbia University Irving Medical Center, New York, New York.ORCID 0000-0002-7834-4968
Harry H LeeProgram for Mathematical Genomics, Department of Systems Biology, Columbia University Irving Medical Center, New York, New York.ORCID 0009-0008-7061-5138
Heekuk ParkDepartment of Medicine, Columbia University Irving Medical Center, New York, New York.ORCID 0000-0001-5815-9717
Daniel E FreedbergDepartment of Medicine, Columbia University Irving Medical Center, New York, New York.ORCID 0000-0003-2023-2899
Charles J LightdaleDepartment of Medicine, Columbia University Irving Medical Center, New York, New York.ORCID 0000-0002-3320-2923
Tal KoremProgram for Mathematical Genomics, Department of Systems Biology, Columbia University Irving Medical Center, New York, New York.ORCID 0000-0002-0609-0858
Julian A AbramsDepartment of Medicine, Columbia University Irving Medical Center, New York, New York.ORCID 0000-0002-6021-9376
Columbia University Irving Medical Center · USBoston University · US

Funding

Weight loss-induced Microbiome and Adipokine Changes in Barrett's EsophagusU54CA163004 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ABRAMS, JULIAN, RUSTGI, ANIL K · 2011 to 2022
$12.5M
The Organoid and Cell Culture CoreP30DK132710 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Robert F. Schwabe · 2022 to 2026
$7.2M
The Oral Microbiome for the Detection of Barretts EsophagusR01CA238433 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ABRAMS, JULIAN · 2019 to 2023
$2.6M
NCI NIH HHS R01 CA238433NCI NIH HHS U54 CA163004NIDDK NIH HHS P30 DK132710
6 · The paper itself

Abstract

backgroundEsophageal adenocarcinoma (EAC) is rising in incidence, and established risk factors do not explain this trend. Esophageal microbiome alterations have been associated with Barrett's esophagus (BE) and dysplasia and EAC. The oral microbiome is tightly linked to the esophageal microbiome; this study aimed to identify salivary microbiome-related factors associated with BE, dysplasia, and EAC.

methodsClinical data and oral health history were collected from patients with and without BE. The salivary microbiome was characterized, assessing differential relative abundance of taxa by 16S rRNA gene sequencing and associations between microbiome composition and clinical features. Microbiome metabolic modeling was used to predict metabolite production.

resultsA total of 244 patients (125 non-BE and 119 BE) were analyzed. Patients with high-grade dysplasia (HGD)/EAC had a significantly higher prevalence of tooth loss (P = 0.001). There were significant shifts with increased dysbiosis associated with HGD/EAC, independent of tooth loss, with the largest shifts within the genus Streptococcus. Modeling predicted significant shifts in the microbiome metabolic capacities, including increases in L-lactic acid and decreases in butyric acid and L-tryptophan production in HGD/EAC.

conclusionsMarked dysbiosis in the salivary microbiome is associated with HGD and EAC, with notable increases within the genus Streptococcus and accompanying changes in predicted metabolite production. Further work is warranted to identify the biological significance of these alterations and to validate metabolic shifts. IMPACT: There is an association between oral dysbiosis and HGD/EAC. Further work is needed to establish the diagnostic, predictive, and causal potential of this relationship.

Indexed as

AdenocarcinomaBarrett EsophagusEsophageal NeoplasmsMicrobiotaTooth LossButyric AcidDysbiosisHumansRNA, Ribosomal, 16SButyric AcidRNA, Ribosomal, 16S

Identifiers

PMID38117184
PMCPMC10955687
OpenAlexW4389994046

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.