Evidence map›Paper›PMID 38116396›Full record

ArticleFrontiers in physics2022

Active condensation of filaments under spatial confinement.

Saad Ansari, Wen Yan, Adam Lamson, Michael J Shelley, Matthew A Glaser, Meredith D Betterton

Abstract read
In one paragraph

Article in Frontiers in physics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Saad AnsariDepartment of Physics, University of Colorado Boulder, Colorado, USA.
Wen YanCenter for Computational Biology, Flatiron Institute, New York, USA.
Adam LamsonCenter for Computational Biology, Flatiron Institute, New York, USA.
Michael J ShelleyCenter for Computational Biology, Flatiron Institute, New York, USA.
Matthew A GlaserDepartment of Physics, University of Colorado Boulder, Colorado, USA.
Meredith D BettertonDepartment of Physics, University of Colorado Boulder, Colorado, USA.

Funding

Mechanisms of Kinesin-5 Motors in Mitotic Spindle AssemblyR01GM124371 · NIGMS · UNIVERSITY OF COLORADO · PI BETTERTON, MEREDITH · 2018 to 2021
$1.3M
NIGMS NIH HHS R01 GM124371
6 · The paper itself

Abstract

Living systems exhibit self-organization, a phenomenon that enables organisms to perform functions essential for life. The interior of living cells is a crowded environment in which the self-assembly of cytoskeletal networks is spatially constrained by membranes and organelles. Cytoskeletal filaments undergo active condensation in the presence of crosslinking motor proteins. In past studies, confinement has been shown to alter the morphology of active condensates. Here, we perform simulations to explore systems of filaments and crosslinking motors in a variety of confining geometries. We simulate spatial confinement imposed by hard spherical, cylindrical, and planar boundaries. These systems exhibit non-equilibrium condensation behavior where crosslinking motors condense a fraction of the overall filament population, leading to coexistence of vapor and condensed states. We find that the confinement lengthscale modifies the dynamics and condensate morphology. With end-pausing crosslinking motors, filaments self-organize into half asters and fully-symmetric asters under spherical confinement, polarity-sorted bilayers and bottle-brush-like states under cylindrical confinement, and flattened asters under planar confinement. The number of crosslinking motors controls the size and shape of condensates, with flattened asters becoming hollow and ring-like for larger motor number. End pausing plays a key role affecting condensate morphology: systems with end-pausing motors evolve into aster-like condensates while those with non-end-pausing crosslinking motor proteins evolve into disordered clusters and polarity-sorted bundles.

Indexed as

active mattercondensationconfinementcrosslinking motorsfilamentsmicrotubulesself-organization

Identifiers

PMID38116396
PMCPMC10730113

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.