Evidence map›Paper›PMID 38114899›Full record

ArticleGenetics, selection, evolution : GSE2023

Natural clines and human management impact the genetic structure of Algerian honey bee populations.

Giovanna Salvatore, Amira Chibani Bahi Amar, Kamila Canale-Tabet, Riad Fridi, Nacera Tabet Aoul, Soumia Saci, Emmanuelle Labarthe, Valentino Palombo, Mariasilvia D'Andrea, Alain Vignal and 1 more

Abstract read
In one paragraph

Article in Genetics, selection, evolution : GSE, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Giovanna SalvatoreDepartment of Agricultural, Environmental and Food Sciences, University of Molise, Via De Sanctis Snc, 86100, Campobasso, Italy. giovanna.salvatore@unimol.it.ORCID http://orcid.org/0000-0003-2442-2091
Amira Chibani Bahi AmarLaboratoire de Génétique Moléculaire et Cellulaire (LGMC), Département de Génétique Moléculaire Appliquée, Université des Sciences et de la Technologie d'Oran Mohamed Boudiaf, USTOMB, BP 1505, El M'naouer, 31000, Oran, Algeria.
Kamila Canale-TabetGenPhySE, Université de Toulouse, INRAE, INPT, INP-ENVT, 31326, Castanet-Tolosan, France.
Riad FridiLaboratoire de Génétique Moléculaire et Cellulaire (LGMC), Département de Génétique Moléculaire Appliquée, Université des Sciences et de la Technologie d'Oran Mohamed Boudiaf, USTOMB, BP 1505, El M'naouer, 31000, Oran, Algeria.
Nacera Tabet AoulLaboratoire de Génétique Moléculaire et Cellulaire (LGMC), Département de Génétique Moléculaire Appliquée, Université des Sciences et de la Technologie d'Oran Mohamed Boudiaf, USTOMB, BP 1505, El M'naouer, 31000, Oran, Algeria.
Soumia SaciNational Institute of Agronomic Research of Algeria (INRAA), El Harrach, Alger, Algeria.
Emmanuelle LabartheGenPhySE, Université de Toulouse, INRAE, INPT, INP-ENVT, 31326, Castanet-Tolosan, France.
Valentino PalomboDepartment of Agricultural, Environmental and Food Sciences, University of Molise, Via De Sanctis Snc, 86100, Campobasso, Italy.
Mariasilvia D'AndreaDepartment of Agricultural, Environmental and Food Sciences, University of Molise, Via De Sanctis Snc, 86100, Campobasso, Italy.
Alain VignalGenPhySE, Université de Toulouse, INRAE, INPT, INP-ENVT, 31326, Castanet-Tolosan, France.
Pierre FauxGenPhySE, Université de Toulouse, INRAE, INPT, INP-ENVT, 31326, Castanet-Tolosan, France. pierre.faux@inrae.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe Algerian honey bee population is composed of two described subspecies A. m. intermissa and A. m. sahariensis, of which little is known regarding population genomics, both in terms of genetic differentiation and of possible contamination by exogenous stock. Moreover, the phenotypic differences between the two subspecies are expected to translate into genetic differences and possible adaptation to heat and drought in A. m. sahariensis. To shed light on the structure of this population and to integrate these two subspecies in the growing dataset of available haploid drone sequences, we performed whole-genome sequencing of 151 haploid drones.

resultsIntegrated analysis of our drone sequences with a similar dataset of European reference populations did not detect any significant admixture in the Algerian honey bees. Interestingly, most of the genetic variation was not found between the A. m. intermissa and A. m. sahariensis subspecies; instead, two main genetic clusters were found along an East-West axis. We found that the correlation between genetic and geographic distances was higher in the Western cluster and that close-family relationships were mostly detected in the Eastern cluster, sometimes at long distances. In addition, we selected a panel of 96 ancestry-informative markers to decide whether a sampled bee is Algerian or not, and tested this panel in simulated cases of admixture.

conclusionsThe differences between the two main genetic clusters suggest differential breeding management between eastern and western Algeria, with greater exchange of genetic material over long distances in the east. The lack of detected admixture events suggests that, unlike what is seen in many places worldwide, imports of queens from foreign countries do not seem to have occurred on a large scale in Algeria, a finding that is relevant for conservation purposes. In addition, the proposed panel of 96 markers was found effective to distinguish Algerian from European honey bees. Therefore, we conclude that applying this approach to other taxa is promising, in particular when genetic differentiation is difficult to capture.

Indexed as

BreedingGenetic DriftAnimalsBeesGenetic StructuresHumansPolymorphism, Single NucleotideWhole Genome Sequencing

Identifiers

PMID38114899
PMCPMC10729559

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.