Evidence map›Paper›PMID 38114725›Full record

ArticleScientific reports2023

Construction and validation of a novel lysosomal signature for hepatocellular carcinoma prognosis, diagnosis, and therapeutic decision-making.

Jianlin Chen, Gan Gao, Yufang He, Yi Zhang, Haixia Wu, Peng Dai, Qingzhu Zheng, Hengbin Huang, Jiamiao Weng, Yue Zheng and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Jianlin Chen *Shengli Clinical Medical College, Fujian Medical University, Fujian, 350001, Fuzhou, China.
Gan Gao *Department of Clinical Laboratory, Liuzhou Hospital, Guangzhou Women and Children's Medical Center, Liuzhou, 545616, Guangxi, China.
Yufang HeShengli Clinical Medical College, Fujian Medical University, Fujian, 350001, Fuzhou, China.
Yi ZhangShengli Clinical Medical College, Fujian Medical University, Fujian, 350001, Fuzhou, China.
Haixia WuShengli Clinical Medical College, Fujian Medical University, Fujian, 350001, Fuzhou, China.
Peng DaiDepartment of Anesthesiology, The First People's Hospital of Foshan, Foshan, 528000, Guangdong, China.
Qingzhu ZhengDepartment of Clinical Laboratory, Fujian Medical University Union Hospital, Fuzhou, 350001, China.
Hengbin HuangShengli Clinical Medical College, Fujian Medical University, Fujian, 350001, Fuzhou, China.
Jiamiao WengShengli Clinical Medical College, Fujian Medical University, Fujian, 350001, Fuzhou, China.
Yue ZhengShengli Clinical Medical College, Fujian Medical University, Fujian, 350001, Fuzhou, China.
Yi HuangShengli Clinical Medical College, Fujian Medical University, Fujian, 350001, Fuzhou, China. Huangyi@fjsl.com.cn.
Fujian Medical University · CNFujian Provincial Hospital · CNFirst People's Hospital of Foshan · CNLiuzhou Maternal and Child Health Hospital · CN

Funding

High-level Hospital Foster Grant of Fujian Provincial Hospital 2020HSJJ06Medical Vertical Project of Fujian Province 2020CXB001Natural Science Foundation of Fujian Province 2019J01176
6 · The paper itself

Abstract

Lysosomes is a well-recognized oncogenic driver and chemoresistance across variable cancer types, and has been associated with tumor invasiveness, metastasis, and poor prognosis. However, the significance of lysosomes in hepatocellular carcinoma (HCC) is not well understood. Lysosomes-related genes (LRGs) were downloaded from Genome Enrichment Analysis (GSEA) databases. Lysosome-related risk score (LRRS), including eight LRGs, was constructed via expression difference analysis (DEGs), univariate and LASSO-penalized Cox regression algorithm based on the TCGA cohort, while the ICGC cohort was obtained for signature validation. Based on GSE149614 Single-cell RNA sequencing data, model gene expression and liver tumor niche were further analyzed. Moreover, the functional enrichments, tumor microenvironment (TME), and genomic variation landscape between LRRS

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsGenes, RegulatorHumansLysosomesMembrane GlycoproteinsMembrane ProteinsMolecular ChaperonesOncogene ProteinsPrognosisTranscription FactorsTumor MicroenvironmentCLN3 protein, humanLAPTM4B protein, humanMembrane GlycoproteinsMembrane ProteinsMolecular ChaperonesOncogene ProteinsTranscription Factors

Identifiers

PMID38114725
PMCPMC10730614
OpenAlexW4389979687

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.