Evidence map›Paper›PMID 38114424›Full record

ArticleProtein science : a publication of the Protein Society2024

Helicity of a tardigrade disordered protein contributes to its protective function during desiccation.

Sourav Biswas, Edith Gollub, Feng Yu, Garrett Ginell, Alex Holehouse, Shahar Sukenik, Thomas C Boothby

Open access · hybridAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
7.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Structural adaptability and surface activity of peptides derived from tardigrade proteins.Protein science : a publication of the Protein Society · 2024
    Article
  9. Labile assembly of a tardigrade protein induces biostasis.Protein science : a publication of the Protein Society · 2024
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Sourav BiswasDepartment of Molecular Biology, University of Wyoming, Laramie, Wyoming, USA.ORCID 0000-0002-5571-2334
Edith GollubDepartment of Chemistry and Biochemistry, University of California, Merced, Merced, California, USA.
Feng YuDepartment of Chemistry and Biochemistry, University of California, Merced, Merced, California, USA.
Garrett GinellDepartment of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri, USA.
Alex HolehouseDepartment of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri, USA.
Shahar SukenikDepartment of Chemistry and Biochemistry, University of California, Merced, Merced, California, USA.
Thomas C BoothbyDepartment of Molecular Biology, University of Wyoming, Laramie, Wyoming, USA.ORCID 0000-0002-8807-3268
University of California, Merced · USUniversity of Wyoming · USWashington University in St. Louis · US

Funding

National Science Foundation 2128067National Science Foundation 2128068National Science Foundation 2128069National Science Foundation 2213983USDA National Institute of Food and Agriculture #1012152Wyoming NASA EPSCoR #80NSSC19M0061
6 · The paper itself

Abstract

To survive extreme drying (anhydrobiosis), many organisms, spanning every kingdom of life, accumulate intrinsically disordered proteins (IDPs). For decades, the ability of anhydrobiosis-related IDPs to form transient amphipathic helices has been suggested to be important for promoting desiccation tolerance. However, evidence empirically supporting the necessity and/or sufficiency of helicity in mediating anhydrobiosis is lacking. Here, we demonstrate that the linker region of CAHS D, a desiccation-related IDP from the tardigrade Hypsibius exemplaris, that contains significant helical structure, is the protective portion of this protein. Perturbing the sequence composition and grammar of the linker region of CAHS D, through the insertion of helix-breaking prolines, modulating the identity of charged residues, or replacement of hydrophobic amino acids with serine or glycine residues results in variants with different degrees of helical structure. Importantly, correlation of protective capacity and helical content in variants generated through different helix perturbing modalities does not show as strong a trend, suggesting that while helicity is important, it is not the only property that makes a protein protective during desiccation. These results provide direct evidence for the decades-old theory that helicity of desiccation-related IDPs is linked to their anhydrobiotic capacity.

Indexed as

Intrinsically Disordered ProteinsTardigradaAnimalsDesiccationProlineIntrinsically Disordered ProteinsProlineanhydrobiosisCAHSdehydrationdesiccation tolerancedisordered proteinhelicitytardigrade

Identifiers

PMID38114424
PMCPMC10804681
OpenAlexW4389976691

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.