ArticleThe Plant cell2024
Genomic signatures of strawberry domestication and diversification.
Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed.
- CRISPR editing of TERMINAL FLOWER 1 recapitulates perpetual flowering in strawberry, mimicking repression by the PERPETUAL FLOWERING locus.Plant physiology · 2026Article
- Using genomic selection to examine subgenome dominance and epistasis in allopolyploid strawberry.The plant genome · 2026Article
- Genome-wide association study of exotic Fragaria germplasm accessions for resistance to Phytophthora crown rot in strawberry.BMC plant biology · 2026Article
- Exploring the efficacy of phenomic and genomic selection for yield and fruit quality traits in strawberry.The plant genome · 2025Article
- Divergent volatilomes between wild and cultivated strawberries: MYB transcription factors underlie flavor differences.Food chemistry. Molecular sciences · 2025Article
- Genotype imputation from low-coverage WGS using haplotype reference panels in cultivated strawberry.BMC genomics · 2025Article
- Article
- Homoploid hybridization adds clarity to the origins of octoploid strawberries.Proceedings of the National Academy of Sciences of the United States of America · 2025Article
- Genetic analysis of predicted vegetative biomass and biomass-related traits from digital phenotyping of strawberry.The plant genome · 2025Article
- Within-family genomic selection in strawberry: Optimization of marker density, trial design, and training set composition.The plant genome · 2025Article
- Yield and Sensorial and Nutritional Quality of Strawberry (Plants (Basel, Switzerland) · 2025Article
- Integrative transcriptomics and phenotyping uncover genetic networks controlling fruit quality in two strawberries (Frontiers in plant science · 2025Article
- Use ofFrontiers in microbiology · 2025Article
- Genome-wide association studies in a diverse strawberry collection unveil loci controlling agronomic and fruit quality traits.The plant genome · 2024Article
- Genotyping-by-sequencing informs conservation of Andean palms sources of non-timber forest products.Evolutionary applications · 2024Article
- Exploration of a European-centered strawberry diversity panel provides markers and candidate genes for the control of fruit quality traits.Horticulture research · 2024Article
- Rapid strawberry domestication left room to grow.The Plant cell · 2024Article
- Strawberry soluble solids QTL with inverse effects on yield.Horticulture research · 2024Article
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Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Cultivated strawberry (Fragaria × ananassa) has a brief history of less than 300 yr, beginning with the hybridization of octoploids Fragaria chiloensis and Fragaria virginiana. Here we explored the genomic signatures of early domestication and subsequent diversification for different climates using whole-genome sequences of 289 wild, heirloom, and modern varieties from two major breeding programs in the United States. Four nonadmixed wild octoploid populations were identified, with recurrent introgression among the sympatric populations. The proportion of F. virginiana ancestry increased by 20% in modern varieties over initial hybrids, and the proportion of F. chiloensis subsp. pacifica rose from 0% to 3.4%. Effective population size rapidly declined during early breeding. Meanwhile, divergent selection for distinct environments reshaped wild allelic origins in 21 out of 28 chromosomes. Overlapping divergent selective sweeps in natural and domesticated populations revealed 16 convergent genomic signatures that may be important for climatic adaptation. Despite 20 breeding cycles since initial hybridization, more than half of loci underlying yield and fruit size are still not under artificial selection. These insights add clarity to the domestication and breeding history of what is now the most widely cultivated fruit in the world.
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