Evidence map›Paper›PMID 38112444›Full record

ArticleApplied and environmental microbiology2024

A rumen virosphere with implications of contribution to fermentation and methane production, and endemism in cattle breeds and individuals.

Yoshiaki Sato, Hiroaki Takebe, Kento Tominaga, Jumpei Yasuda, Hajime Kumagai, Hiroyuki Hirooka, Takashi Yoshida

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Yoshiaki SatoDepartment of Agrobiology and Bioresources, School of Agriculture, Utsunomiya University, Tochigi, Japan.ORCID 0000-0001-6018-2801
Hiroaki TakebeLaboratory of Marine Microbiology, Division of Applied Biosciences, Graduate School of Agriculture, Kyoto University, Kyoto, Japan.
Kento TominagaDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, the University of Tokyo, Chiba, Japan.ORCID 0000-0003-4814-5690
Jumpei YasudaIwate Agricultural Research Center Animal Industry Research Institute, Iwate, Japan.
Hajime KumagaiLaboratory of Animal Husbandry Resources, Division of Applied Biosciences, Graduate School of Agriculture, Kyoto University, Kyoto, Japan.
Hiroyuki HirookaLaboratory of Animal Husbandry Resources, Division of Applied Biosciences, Graduate School of Agriculture, Kyoto University, Kyoto, Japan.
Takashi YoshidaLaboratory of Marine Microbiology, Division of Applied Biosciences, Graduate School of Agriculture, Kyoto University, Kyoto, Japan.ORCID 0000-0002-5257-0617
Kyoto University · JPIwate Biotechnology Research Center · JPThe University of Tokyo · JPUtsunomiya University · JP

Funding

Japan Society for the Promotion of Science (JSPS) JP21H05057Kieikai Research Foundation
6 · The paper itself

Abstract

Viruses have a potential to modify the ruminal digestion via infection and cell lysis of prokaryotes, suggesting that viruses are related to animal performance and methane production. This study aimed to elucidate the genome-based diversity of rumen viral communities and the differences in virus structure between individuals and cattle breeds and to understand how viruses influence on the rumen. To these ends, a metagenomic sequencing of virus-like particles in the rumen of 22 Japanese cattle, including Japanese Black (JB,

Indexed as

EuryarchaeotaRumenAnimalsBacteriaCattleCelluloseDietDigestionFermentationHumansMethaneCelluloseMethanecattlefiber digestionhost-virus interactionsmethanerumenviral genomes

Identifiers

PMID38112444
PMCPMC10807420
OpenAlexW4389949051

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.