Evidence map›Paper›PMID 38111711›Full record

ArticleFrontiers in endocrinology2023

HNF4α isoforms regulate the circadian balance between carbohydrate and lipid metabolism in the liver.

Jonathan R Deans, Poonamjot Deol, Nina Titova, Sarah H Radi, Linh M Vuong, Jane R Evans, Songqin Pan, Johannes Fahrmann, Jun Yang, Bruce D Hammock and 4 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in endocrinology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. A 20 Bp Indel ofAnimals : an open access journal from MDPI · 2026
    Article
  4. The role of HNF4α in adenocarcinoma.Biochemical Society transactions · 2026
    Review
  5. Article
  6. Hepatocyte Nuclear Factor 4 Alpha: A Key Regulator of Liver Disease Pathology and Haemostatic Disorders.Liver international : official journal of the International Association for the Study of the Liver · 2025
    Review
  7. Review
  8. HNF4α in Hepatocyte Health and Disease.Seminars in liver disease · 2023
    Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Jonathan R DeansDepartment of Molecular, Cell and Systems Biology, University of California, Riverside, Riverside, CA, United States.
Poonamjot Deol *Department of Molecular, Cell and Systems Biology, University of California, Riverside, Riverside, CA, United States.
Nina Titova *Department of Molecular, Cell and Systems Biology, University of California, Riverside, Riverside, CA, United States.
Sarah H Radi *Department of Molecular, Cell and Systems Biology, University of California, Riverside, Riverside, CA, United States.
Linh M Vuong *Department of Molecular, Cell and Systems Biology, University of California, Riverside, Riverside, CA, United States.
Jane R EvansDepartment of Molecular, Cell and Systems Biology, University of California, Riverside, Riverside, CA, United States.
Songqin PanProteomics Core, Institute for Integrative Genome Biology, University of California, Riverside, Riverside, CA, United States.
Johannes FahrmannNational Institutes of Health West Coast Metabolomics Center, University of California, Davis, Davis, CA, United States.
Jun YangDepartment of Entomology and Nematology & UCD Comprehensive Cancer Center, University of California, Davis, Davis, CA, United States.
Bruce D HammockDepartment of Entomology and Nematology & UCD Comprehensive Cancer Center, University of California, Davis, Davis, CA, United States.
Oliver FiehnNational Institutes of Health West Coast Metabolomics Center, University of California, Davis, Davis, CA, United States.
Baharan FekryDepartment of Biochemistry and Molecular Biology, McGovern Medical School at the University of Texas Health Science Center (UT Health), Houston, TX, United States.
Kristin Eckel-MahanDepartment of Biochemistry and Molecular Biology, McGovern Medical School at the University of Texas Health Science Center (UT Health), Houston, TX, United States.
Frances M SladekDepartment of Molecular, Cell and Systems Biology, University of California, Riverside, Riverside, CA, United States.
University of California, Riverside · USNational Institutes of Health · USThe University of Texas Health Science Center at Houston · USUniversity of California, Davis · US

Funding

Workshop on Environmental Technology Transfer and EntrepreneurshipP42ES004699 · NIEHS · UNIVERSITY OF CALIFORNIA DAVIS · PI HAMMOCK, BRUCE D · 1987 to 2021
$50.1M
West Coast Central Comprehensive Metabolomics Resource Core (WC3MRC)U24DK097154 · NIDDK · UNIVERSITY OF CALIFORNIA AT DAVIS · PI FIEHN, OLIVER · 2012 to 2017
$9.9M
Research Training in Environmental ToxicologyT32ES018827 · NIEHS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI Yinsheng Wang · 2010 to 2026
$5.3M
REGULATION OF LIVER SPECIFIC GENE EXPRESSIONR01DK053892 · NIDDK · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI SLADEK, FRANCES M. · 1998 to 2015
$5.3M
HYDROLYTIC ENZYMES IN THE METABOLISM OF TOXINSR01ES002710 · NIEHS · UNIVERSITY OF CALIFORNIA DAVIS · PI HAMMOCK, BRUCE D · 1985 to 2018
$4.0M
Balance between HNF4a isoforms in the carbohydrate-lipid metabolic switchR01DK127082 · NIDDK · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI SLADEK, FRANCES M. · 2021 to 2025
$2.0M
Nuclear Receptor DNA Binding in Human Physiology and DiseaseR01DK094707 · NIDDK · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI SLADEK, FRANCES M. · 2012 to 2015
$1.5M
An LTQ-Orbitrap Elite with ETD for the Keck Proteomics FacilityS10OD010669 · OD · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI WANG, YINSHENG · 2013 to 2013
$600k
NIDDK NIH HHS R01 DK053892NIDDK NIH HHS R01 DK094707NIDDK NIH HHS R01 DK127082NIDDK NIH HHS U24 DK097154NIEHS NIH HHS P42 ES004699NIEHS NIH HHS R01 ES002710NIEHS NIH HHS T32 ES018827NIH HHS S10 OD010669
6 · The paper itself

Abstract

Hepatocyte Nuclear Factor 4α (HNF4α), a master regulator of hepatocyte differentiation, is regulated by two promoters (P1 and P2) which drive the expression of different isoforms. P1-HNF4α is the major isoform in the adult liver while P2-HNF4α is thought to be expressed only in fetal liver and liver cancer. Here, we show that P2-HNF4α is indeed expressed in the normal adult liver at Zeitgeber time (ZT)9 and ZT21. Using exon swap mice that express only P2-HNF4α we show that this isoform orchestrates a distinct transcriptome and metabolome via unique chromatin and protein-protein interactions, including with different clock proteins at different times of the day leading to subtle differences in circadian gene regulation. Furthermore, deletion of the

Indexed as

Hepatocyte Nuclear Factor 4Lipid MetabolismAnimalsCarbohydratesFemaleLiverMiceProtein IsoformsCarbohydratesHepatocyte Nuclear Factor 4Hnf4a protein, mouseProtein Isoformsalternative promotercircadian clockcytochrome P450fastingketogenesismetabolic switchnuclear receptorsex-specific gene expression

Identifiers

PMID38111711
PMCPMC10726135
OpenAlexW4389309784

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.