Evidence map›Paper›PMID 38110404›Full record

ArticleNature communications2023

Dissecting the genetic landscape of GPCR signaling through phenotypic profiling in C. elegans.

Longjun Pu, Jing Wang, Qiongxuan Lu, Lars Nilsson, Alison Philbrook, Anjali Pandey, Lina Zhao, Robin van Schendel, Alan Koh, Tanara V Peres and 10 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. ThebioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Gas-sensing neurons prime mitochondrial fitness to offset metabolic stress.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Article
  7. The anticonvulsant and mood-stabilizing drug valproic acid attractsbioRxiv : the preprint server for biology · 2025
    Article
  8. Article
  9. Review
  10. Article
  11. TheiScience · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 4 institutions in 4 countries.

Longjun Pu *Department of Molecular Biology, Umeå University, Umeå, Sweden.
Jing Wang *Department of Molecular Biology, Umeå University, Umeå, Sweden.
Qiongxuan LuDepartment of Molecular Biology, Umeå University, Umeå, Sweden.
Lars NilssonDepartment of Molecular Biology, Umeå University, Umeå, Sweden.
Alison PhilbrookDepartment of Biology, MS 008, Brandeis University, 415 South Street, Waltham, MA, 02454, USA.
Anjali PandeyDepartment of Biology, MS 008, Brandeis University, 415 South Street, Waltham, MA, 02454, USA.
Lina ZhaoDepartment of Molecular Biology, Umeå University, Umeå, Sweden.
Robin van SchendelDepartment of Human Genetics, Leiden University Medical Center, Leiden, The Netherlands.ORCID 0000-0001-7068-0679
Alan KohMRC Laboratory of Medical Sciences, London, W12 0HS, UK.ORCID 0000-0002-9267-455X
Tanara V PeresMRC Laboratory of Medical Sciences, London, W12 0HS, UK.ORCID 0000-0003-0199-8653
Weheliye H HashiMRC Laboratory of Medical Sciences, London, W12 0HS, UK.
Si Lhyam MyintDepartment of Molecular Biology, Umeå University, Umeå, Sweden.
Chloe WilliamsDepartment of Integrative Medical Biology, Umeå University, Umeå, Sweden.
Jonathan D GilthorpeDepartment of Integrative Medical Biology, Umeå University, Umeå, Sweden.ORCID 0000-0002-6884-4774
Sun Nyunt WaiDepartment of Molecular Biology, Umeå University, Umeå, Sweden.ORCID 0000-0003-4793-4671
Andre BrownMRC Laboratory of Medical Sciences, London, W12 0HS, UK.
Marcel TijstermanDepartment of Human Genetics, Leiden University Medical Center, Leiden, The Netherlands.ORCID 0000-0001-8465-9002
Piali SenguptaDepartment of Biology, MS 008, Brandeis University, 415 South Street, Waltham, MA, 02454, USA.ORCID 0000-0001-7468-0035
Johan HenrikssonDepartment of Molecular Biology, Umeå University, Umeå, Sweden. johan.henriksson@umu.se.ORCID 0000-0002-7745-2844
Changchun ChenDepartment of Molecular Biology, Umeå University, Umeå, Sweden. changchun.chen@umu.se.ORCID 0000-0003-2233-8996
Umeå University · SEImperial College London · GBBrandeis University · USLeiden University Medical Center · NL

Funding

Quantitative Neuroscience: Tools for Bridging Levels of AnalysisT32NS007292 · NINDS · BRANDEIS UNIVERSITY · PI GINA G TURRIGIANO · 1986 to 2026
$12.7M
Mechanisms of sensory neuron morphological diversification, signaling, and functional plasticityR35GM122463 · NIGMS · BRANDEIS UNIVERSITY · PI Piali Sengupta · 2017 to 2026
$7.7M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
NIGMS NIH HHS R35 GM122463NIH HHS P40 OD010440NINDS NIH HHS T32 NS007292
6 · The paper itself

Abstract

G protein-coupled receptors (GPCRs) mediate responses to various extracellular and intracellular cues. However, the large number of GPCR genes and their substantial functional redundancy make it challenging to systematically dissect GPCR functions in vivo. Here, we employ a CRISPR/Cas9-based approach, disrupting 1654 GPCR-encoding genes in 284 strains and mutating 152 neuropeptide-encoding genes in 38 strains in C. elegans. These two mutant libraries enable effective deorphanization of chemoreceptors, and characterization of receptors for neuropeptides in various cellular processes. Mutating a set of closely related GPCRs in a single strain permits the assignment of functions to GPCRs with functional redundancy. Our analyses identify a neuropeptide that interacts with three receptors in hypoxia-evoked locomotory responses, unveil a collection of regulators in pathogen-induced immune responses, and define receptors for the volatile food-related odorants. These results establish our GPCR and neuropeptide mutant libraries as valuable resources for the C. elegans community to expedite studies of GPCR signaling in multiple contexts.

Indexed as

Caenorhabditis elegansNeuropeptidesAnimalsChemoreceptor CellsPhylogenyReceptors, G-Protein-CoupledNeuropeptidesReceptors, G-Protein-Coupled

Identifiers

PMID38110404
PMCPMC10728192
OpenAlexW4389889679

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.