Evidence map›Paper›PMID 38109538›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

A transcriptional program underlying the circannual rhythms of gonadal development in medaka.

Tomoya Nakayama, Miki Tanikawa, Yuki Okushi, Thoma Itoh, Tsuyoshi Shimmura, Michiyo Maruyama, Taiki Yamaguchi, Akiko Matsumiya, Ai Shinomiya, Ying-Jey Guh and 8 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
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  5. DNA methylation site loss for plasticity-led novel trait genetic fixation.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  6. Article
  7. Article
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  9. MedakaBase as a unified genomic resource platform for medaka fish biology.DNA research : an international journal for rapid publication of reports on genes and genomes · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 1 country.

Tomoya Nakayama *Laboratory of Animal Integrative Physiology, Department of Animal Sciences, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.ORCID 0000-0003-4175-3167
Miki Tanikawa *Laboratory of Animal Integrative Physiology, Department of Animal Sciences, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.ORCID 0009-0006-9770-2405
Yuki Okushi *Laboratory of Animal Integrative Physiology, Department of Animal Sciences, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.ORCID 0009-0001-4368-8314
Thoma ItohExploratory Research Center on Life and Living Systems, National Institutes of Natural Sciences, Okazaki 444-8787, Japan.ORCID 0000-0003-2582-1000
Tsuyoshi ShimmuraDivision of Seasonal Biology, National Institute for Basic Biology, National Institutes of Natural Sciences, 444-8585 Okazaki, Japan.ORCID 0000-0002-9136-2976
Michiyo MaruyamaLaboratory of Animal Integrative Physiology, Department of Animal Sciences, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.ORCID 0000-0002-8821-5756
Taiki YamaguchiLaboratory of Animal Integrative Physiology, Department of Animal Sciences, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.ORCID 0000-0002-9895-4739
Akiko MatsumiyaLaboratory of Animal Integrative Physiology, Department of Animal Sciences, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.
Ai ShinomiyaDivision of Seasonal Biology, National Institute for Basic Biology, National Institutes of Natural Sciences, 444-8585 Okazaki, Japan.ORCID 0000-0003-3784-0532
Ying-Jey GuhLaboratory of Animal Integrative Physiology, Department of Animal Sciences, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.ORCID 0000-0003-1148-8315
Junfeng ChenLaboratory of Animal Integrative Physiology, Department of Animal Sciences, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.ORCID 0000-0001-6155-411X
Kiyoshi NaruseDepartment of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Okazaki 444-8787, Japan.ORCID 0000-0001-9185-3495
Hiroshi KudohCenter for Ecological Research, Kyoto University, Otsu, Shiga 520-2113, Japan.ORCID 0000-0001-9777-4886
Yohei KondoExploratory Research Center on Life and Living Systems, National Institutes of Natural Sciences, Okazaki 444-8787, Japan.ORCID 0000-0002-2801-4522
Honda NaokiExploratory Research Center on Life and Living Systems, National Institutes of Natural Sciences, Okazaki 444-8787, Japan.ORCID 0000-0001-6816-9126
Kazuhiro AokiExploratory Research Center on Life and Living Systems, National Institutes of Natural Sciences, Okazaki 444-8787, Japan.ORCID 0000-0001-7263-1555
Atsushi J NaganoDepartment of Life Sciences, Faculty of Agriculture, Ryukoku University, Otsu 520-2194, Japan.ORCID 0000-0001-7891-5049
Takashi YoshimuraLaboratory of Animal Integrative Physiology, Department of Animal Sciences, Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya 464-8601, Japan.ORCID 0000-0001-7018-9652
National Institute for Basic Biology · JPNagoya University · JPHiroshima University · JPKyoto University · JPRyukoku University · JP

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) 19H05546MEXT | Japan Society for the Promotion of Science (JSPS) 19H05643MEXT | Japan Society for the Promotion of Science (JSPS) 19H05798
6 · The paper itself

Abstract

To cope with seasonal environmental changes, organisms have evolved approximately 1-y endogenous circannual clocks. These circannual clocks regulate various physiological properties and behaviors such as reproduction, hibernation, migration, and molting, thus providing organisms with adaptive advantages. Although several hypotheses have been proposed, the genes that regulate circannual rhythms and the underlying mechanisms controlling long-term circannual clocks remain unknown in any organism. Here, we show a transcriptional program underlying the circannual clock in medaka fish (

Indexed as

OryziasAnimalsCircadian RhythmGonadsPhotoperiodSeasonscircadian rhythmcircannual rhythmphotoperiodismseasonal adaptationseasonally oscillating genes

Identifiers

PMID38109538
PMCPMC10756274
OpenAlexW4389879761

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.