Evidence map›Paper›PMID 38108885›Full record

ArticleActa crystallographica. Section F, Structural biology communications2023

Direct relationship between dimeric form and activity in the acidic copper-zinc superoxide dismutase from lemon.

Ratna A Utami, Hiromi Yoshida, Lydia H Kartadinata, Virgi A Abdillah, Cut R Faratilla, Debbie S Retnoningrum, Wangsa T Ismaya

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 83% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Ratna A UtamiLaboratory of Pharmaceutical Biotechnology, Department of Pharmaceutics, School of Pharmacy, Bandung Institute of Technology, Jalan Ganesa No. 10, Bandung 40132, Indonesia.ORCID 0000-0002-5660-9961
Hiromi YoshidaDepartment of Basic Life Science, Faculty of Medicine, Kagawa University, 1750-1 Ikenobe, Miki-cho, Kita-gun, Kagawa 761-0793, Japan.ORCID 0000-0001-8333-8215
Lydia H KartadinataLaboratory of Pharmaceutical Biotechnology, Department of Pharmaceutics, School of Pharmacy, Bandung Institute of Technology, Jalan Ganesa No. 10, Bandung 40132, Indonesia.
Virgi A AbdillahLaboratory of Pharmaceutical Biotechnology, Department of Pharmaceutics, School of Pharmacy, Bandung Institute of Technology, Jalan Ganesa No. 10, Bandung 40132, Indonesia.ORCID 0009-0008-1266-4177
Cut R FaratillaLaboratory of Pharmaceutical Biotechnology, Department of Pharmaceutics, School of Pharmacy, Bandung Institute of Technology, Jalan Ganesa No. 10, Bandung 40132, Indonesia.
Debbie S RetnoningrumLaboratory of Pharmaceutical Biotechnology, Department of Pharmaceutics, School of Pharmacy, Bandung Institute of Technology, Jalan Ganesa No. 10, Bandung 40132, Indonesia.
Wangsa T IsmayaDexa Laboratories of Biomolecular Sciences, Jl. Industri Selatan V Blok PP No. 7, Kawasan Industri Jababeka II, Cikarang 17550, Indonesia.ORCID 0000-0001-5467-5343
Bandung Institute of Technology · IDKagawa University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The copper-zinc superoxide dismutase (CuZnSOD) from lemon (SOD_CL) is active in an acidic environment and resists proteolytic degradation. The enzyme occurs as a dimer, which has an indirect effect on the enzyme activity as the monomer retains only ∼35% of the activity. Here, the crystal structure of SOD_CL at 1.86 Å resolution is reported that may explain this peculiarity. The crystal belonged to space group P2

Indexed as

CopperSuperoxide DismutaseCrystallography, X-RayCytoplasmZincCopperSuperoxide DismutaseZincCitrus limoncopper–zinc superoxide dismutaseslemonstabilizationsuperoxide dismutases

Identifiers

PMID38108885
PMCPMC10833119
OpenAlexW4389900065

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.