Evidence map›Paper›PMID 38106612›Full record

ArticlePatterns (New York, N.Y.)2023

Using alternative SMILES representations to identify novel functional analogues in chemical similarity vector searches.

Clayton W Kosonocky, Aaron L Feller, Claus O Wilke, Andrew D Ellington

Abstract read
In one paragraph

Article in Patterns (New York, N.Y.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Clayton W KosonockyDepartment of Molecular Biosciences, University of Texas at Austin, Austin, TX 78705, USA.
Aaron L FellerDepartment of Molecular Biosciences, University of Texas at Austin, Austin, TX 78705, USA.
Claus O WilkeDepartment of Integrative Biology, University of Texas at Austin, Austin, TX 78705, USA.
Andrew D EllingtonDepartment of Molecular Biosciences, University of Texas at Austin, Austin, TX 78705, USA.

Funding

Directed evolution of broadly fungible biosensorsR01GM146093 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI Andrew D Ellington · 2023 to 2026
$1.3M
NIGMS NIH HHS R01 GM146093
6 · The paper itself

Abstract

Chemical similarity searches are a widely used family of

Indexed as

BERTcanonicalizationchemical similarity searchdrug discoverymachine learningprompt engineeringSMILEStransformervector search

Identifiers

PMID38106612
PMCPMC10724362

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.