Evidence map›Paper›PMID 38106088›Full record

ArticlebioRxiv : the preprint server for biology2023

SINGLE CELL DISSECTION OF DEVELOPMENTAL ORIGINS AND TRANSCRIPTIONAL HETEROGENEITY IN B-CELL ACUTE LYMPHOBLASTIC LEUKEMIA.

Ilaria Iacobucci, Andy G X Zeng, Qingsong Gao, Laura Garcia-Prat, Pradyumna Baviskar, Sayyam Shah, Alex Murison, Veronique Voisin, Michelle Chan-Seng-Yue, Cheng Cheng and 15 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 17 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors at 9 institutions in 3 countries.

Laura Garcia-PratORCID 0000-0002-3786-4852
Pradyumna BaviskarORCID 0000-0003-1110-5695
Sayyam Shah
Veronique Voisin
Michelle Chan-Seng-Yue
Cheng Cheng
Chunxu Qu
Colin Bailey
Matthew Lear
Matthew T WitkowskiORCID 0000-0003-1434-4288
Xin Zhou
Airen Zaldivar Peraza
Karishma GangwaniORCID 0000-0002-2986-4481
Mark R Litzow
Jacob M Rowe
Elisabeth M Paietta
Charles G MullighanORCID 0000-0002-1871-1850
St. Jude Children's Research Hospital · USUniversity Health Network · CACleveland Clinic · USMayo Clinic in Arizona · USMontefiore Medical Center · USTechnion – Israel Institute of Technology · ILUniversity of Chicago · USUniversity of Colorado Anschutz Medical Campus · USUniversity of Pennsylvania · US

Funding

Dissecting the Functional Role of Monocytes in B-cell Acute Lymphoblastic Leukemia SurvivalK22CA258520 · NCI · UNIVERSITY OF COLORADO DENVER · PI WITKOWSKI, MATTHEW · 2022 to 2024
$553k
NCI NIH HHS K22 CA258520
6 · The paper itself

Abstract

Sequencing of bulk tumor populations has improved genetic classification and risk assessment of B-ALL, but does not directly examine intratumor heterogeneity or infer leukemia cellular origins. We profiled 89 B-ALL samples by single-cell RNA-seq (scRNA-seq) and compared them to a reference map of normal human B-cell development established using both functional and molecular assays. Intra-sample heterogeneity was driven by cell cycle, metabolism, differentiation, and inflammation transcriptional programs. By inference of B lineage developmental state composition, nearly all samples possessed a high abundance of pro-B cells, with variation between samples mainly driven by sub-populations. However,

Identifiers

PMID38106088
PMCPMC10723356
OpenAlexW4389515272

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.