Evidence map›Paper›PMID 38104240›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2024

Engineered mischarged transfer RNAs for correcting pathogenic missense mutations.

Yichen Hou, Wen Zhang, Philip T McGilvray, Marek Sobczyk, Tianxin Wang, Shao Huan Samuel Weng, Allen Huff, Sihao Huang, Noah Pena, Christopher D Katanski and 1 more

Open access · greenAbstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Mistranslating tRNA variants impact the proteome and phosphoproteome ofbioRxiv : the preprint server for biology · 2025
    Article
  5. Review
  6. Article
  7. Natural human tRNARNA (New York, N.Y.) · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Missense suppressor tRNA therapeutics correct disease-causing alleles by misreading the genetic code.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Yichen HouCommittee on Genomics, Genetics and Systems Biology, University of Chicago, Chicago, IL 60637, USA.
Wen ZhangDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, IL 60637, USA.
Philip T McGilvrayhC Bioscience, Boston, MA 02210, USA.
Marek SobczykDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, IL 60637, USA.
Tianxin WangDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, IL 60637, USA.
Shao Huan Samuel WengProteomics Platform, University of Chicago, Chicago, IL 60637, USA.
Allen HuffProteomics Platform, University of Chicago, Chicago, IL 60637, USA.
Sihao HuangDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, IL 60637, USA.
Noah PenaDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, IL 60637, USA.
Christopher D KatanskihC Bioscience, Boston, MA 02210, USA. Electronic address: chris.katanski@hcbioscience.com.
Tao PanDepartment of Biochemistry and Molecular Biology, University of Chicago, Chicago, IL 60637, USA. Electronic address: taopan@uchicago.edu.
University of Chicago · USBioscience Research · USUniversity of Illinois Chicago · US

Funding

Transcriptome-wide base-resolution sequencing of pseudouridine in human normal and AD brain tissues-CEGS Admin supplement 2020-2021RM1HG008935 · NHGRI · UNIVERSITY OF CHICAGO · PI HE, CHUAN · 2016 to 2025
$24.4M
University of Chicago Initiative for Maximizing Student Development (IMSD) - Renewal 01R25GM109439 · NIGMS · UNIVERSITY OF CHICAGO · PI SCHWARTZ, NANCY B · 2014 to 2023
$5.7M
Targets and functions of the mammalian snoRNAomeR01HG012780 · NHGRI · UNIVERSITY OF CHICAGO · PI HE, CHUAN, PAN, TAO · 2022 to 2025
$2.8M
NHGRI NIH HHS R01 HG012780NHGRI NIH HHS RM1 HG008935NIGMS NIH HHS R25 GM109439
6 · The paper itself

Abstract

Missense mutations account for approximately 50% of pathogenic mutations in human genetic diseases, and most lack effective treatments. Gene therapies, gene editing, and RNA therapies, including transfer RNA (tRNA) modalities, are common strategies for genetic disease treatments. However, reported tRNA therapies are for nonsense mutations only. It has not been explored how tRNAs can be engineered to correct missense mutations. Here, we describe missense-correcting tRNAs (mc-tRNAs) as a potential therapeutic for correcting pathogenic missense mutations. Mc-tRNAs are engineered tRNAs charged with one amino acid, but read codons of another in translation. We first developed a series of fluorescent protein-based reporters that indicate the successful correction of missense mutations via restoration of fluorescence. We engineered mc-tRNAs that effectively corrected serine and arginine missense mutations in the reporters and confirmed the amino acid substitution by mass spectrometry and mc-tRNA expression by sequencing. We examined the transcriptome response to mc-tRNA expression and found some mc-tRNAs induced minimum transcriptomic changes. Furthermore, we applied an mc-tRNA to rescue a pathogenic CAPN3 Arg-to-Gln mutant involved in LGMD2A. These results establish a versatile pipeline for mc-tRNA engineering and demonstrate the potential of mc-tRNA as an alternative therapeutic platform for the treatment of genetic disorders.

Indexed as

Mutation, MissenseRNA, TransferAmino AcidsCodonHumansMutationAmino AcidsCodonRNA, Transfergenetic disorderlimb-girdle muscular dystrophy type 2Amischargingmissense correcting tRNAmistranslationtRNA therapy

Identifiers

PMID38104240
PMCPMC10861979
OpenAlexW4389804779

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.