Evidence map›Paper›PMID 38098875›Full record

ArticleComputational statistics & data analysis2024

Hierarchical False Discovery Rate Control for High-dimensional Survival Analysis with Interactions.

Weijuan Liang, Qingzhao Zhang, Shuangge Ma

Abstract read
In one paragraph

Article in Computational statistics & data analysis, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. High-Dimensional Gene-Environment Interaction Analysis.Annual review of statistics and its application · 2025
    Article
  3. Review
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

3 authors.

Weijuan LiangDepartment of Biostatistics, Yale School of Public Health, New Haven, Connecticut, USA.
Qingzhao ZhangDepartment of Statistics and Data Science, School of Economics, The Wang Yanan Institute for Studies in Economics, and Fujian Key Lab of Statistics, Xiamen University, Xiamen, China.
Shuangge MaDepartment of Biostatistics, Yale School of Public Health, New Haven, Connecticut, USA.

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Novel methods for identifying genetic interactions in cancer prognosisR01CA204120 · NCI · YALE UNIVERSITY · PI Shuangge Ma · 2016 to 2026
$3.5M
NCATS NIH HHS UL1 TR001863NCI NIH HHS R01 CA204120
6 · The paper itself

Abstract

With the development of data collection techniques, analysis with a survival response and high-dimensional covariates has become routine. Here we consider an interaction model, which includes a set of low-dimensional covariates, a set of high-dimensional covariates, and their interactions. This model has been motivated by gene-environment (G-E) interaction analysis, where the E variables have a low dimension, and the G variables have a high dimension. For such a model, there has been extensive research on estimation and variable selection. Comparatively, inference studies with a valid false discovery rate (FDR) control have been very limited. The existing high-dimensional inference tools cannot be directly applied to interaction models, as interactions and main effects are not "equal". In this article, for high-dimensional survival analysis with interactions, we model survival using the Accelerated Failure Time (AFT) model and adopt a "weighted least squares + debiased Lasso" approach for estimation and selection. A hierarchical FDR control approach is developed for inference and respect of the "main effects, interactions" hierarchy. The asymptotic distribution properties of the debiased Lasso estimators are rigorously established. Simulation demonstrates the satisfactory performance of the proposed approach, and the analysis of a breast cancer dataset further establishes its practical utility.

Indexed as

Debiased LassoFDR controlHierarchyHigh-dimensional survivalInteraction analysis

Identifiers

PMID38098875
PMCPMC10718515

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.