Evidence map›Paper›PMID 38097371›Full record

ArticleLife science alliance2024

Changes in searching behaviour of CSL transcription complexes in Notch active conditions.

Sarah Baloul, Charalambos Roussos, Maria Gomez-Lamarca, Leila Muresan, Sarah Bray

Open access · goldAbstract read
In one paragraph

Article in Life science alliance, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Dynamic microenvironments shape nuclear organization and gene expression.Current opinion in genetics & development · 2024
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sarah BaloulPhysiology Development and Neuroscience, Cambridge Advanced Imaging Centre, University of Cambridge, Cambridge, UK.ORCID https://orcid.org/0000-0002-7204-8578
Charalambos RoussosPhysiology Development and Neuroscience, Cambridge Advanced Imaging Centre, University of Cambridge, Cambridge, UK.
Maria Gomez-LamarcaPhysiology Development and Neuroscience, Cambridge Advanced Imaging Centre, University of Cambridge, Cambridge, UK.ORCID https://orcid.org/0000-0003-3750-7959
Leila MuresanPhysiology Development and Neuroscience, Cambridge Advanced Imaging Centre, University of Cambridge, Cambridge, UK lam94@cam.ac.uk.ORCID https://orcid.org/0000-0002-7602-0249
Sarah BrayPhysiology Development and Neuroscience, Cambridge Advanced Imaging Centre, University of Cambridge, Cambridge, UK sjb32@cam.ac.uk.ORCID https://orcid.org/0000-0002-1642-599X
University of Cambridge · GB

Funding

Medical Research Council MR/T014156/1Wellcome Trust 212207/Z/18/Z
6 · The paper itself

Abstract

During development cells receive a variety of signals, which are of crucial importance to their fate determination. One such source of signal is the Notch signalling pathway, where Notch activity regulates expression of target genes through the core transcription factor CSL. To understand changes in transcription factor behaviour that lead to transcriptional changes in Notch active cells, we have probed CSL behaviours in real time, using in vivo Single Molecule Localisation Microscopy. Trajectory analysis reveals that Notch-On conditions increase the fraction of bound CSL molecules, but also the proportion of molecules with exploratory behaviours. These properties are shared by the co-activator Mastermind. Furthermore, both CSL and Mastermind, exhibit characteristics of local exploration near a Notch target locus. A similar behaviour is observed for CSL molecules diffusing in the vicinity of other bound CSL clusters. We suggest therefore that CSL acquires an exploratory behaviour when part of the activation complex, favouring local searching and retention close to its target enhancers. This change explains how CSL can efficiently increase its occupancy at target sites in Notch-On conditions.

Indexed as

DNA-Binding ProteinsReceptors, NotchAnimalsAppetitive BehaviorGene Expression RegulationTranscription FactorsDNA-Binding ProteinsReceptors, NotchTranscription Factors

Identifiers

PMID38097371
PMCPMC10721712
OpenAlexW4389727081

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.