Evidence map›Paper›PMID 38096051›Full record

ArticleCell reports2023

MeCP2 represses the activity of topoisomerase IIβ in long neuronal genes.

Sabin A Nettles, Yoshiho Ikeuchi, Katheryn B Lefton, Ladan Abbasi, Alyssa Erickson, Chibueze Agwu, Thomas Papouin, Azad Bonni, Harrison W Gabel

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Sabin A NettlesDepartment of Neuroscience, Washington University School of Medicine, St. Louis, MO 63110, USA.
Yoshiho IkeuchiDepartment of Neuroscience, Washington University School of Medicine, St. Louis, MO 63110, USA.
Katheryn B LeftonDepartment of Neuroscience, Washington University School of Medicine, St. Louis, MO 63110, USA.
Ladan AbbasiDepartment of Neuroscience, Washington University School of Medicine, St. Louis, MO 63110, USA.
Alyssa EricksonDepartment of Neuroscience, Washington University School of Medicine, St. Louis, MO 63110, USA.
Chibueze AgwuDepartment of Neuroscience, Washington University School of Medicine, St. Louis, MO 63110, USA.
Thomas PapouinDepartment of Neuroscience, Washington University School of Medicine, St. Louis, MO 63110, USA.
Azad BonniDepartment of Neuroscience, Washington University School of Medicine, St. Louis, MO 63110, USA.
Harrison W GabelDepartment of Neuroscience, Washington University School of Medicine, St. Louis, MO 63110, USA. Electronic address: gabelh@wustl.edu.
Washington University in St. Louis · US

Funding

WUIDDRC Supplement-Supporting the health and well-being of children with intellectual and developmental disability during COVID-19 pandemicP50HD103525 · NICHD · WASHINGTON UNIVERSITY · PI JEFFREY D MILBRANDT · 2020 to 2026
$15.5M
SIGNAL TRANSDUCTION PATHWAYS REGULATING NEURON SURVIVALR01NS041021 · NINDS · WASHINGTON UNIVERSITY · PI GABEL, HARRISON W · 2001 to 2023
$7.7M
MECHANISMS OF EPIGENETIC REGULATION IN NERVOUS SYSTEM DEVELOPMENTR01MH117405 · NIMH · WASHINGTON UNIVERSITY · PI Harrison W Gabel · 2019 to 2026
$3.9M
Role of astrocyte-based cholinergic neuromodulation in cognition and in the treatment of cognitive disordersR01MH127163 · NIMH · WASHINGTON UNIVERSITY · PI PAPOUIN, THOMAS · 2021 to 2025
$1.9M
DIFFERENCES IN SYNAPTIC VS NONSYNAPTIC AMPA RECEPTORSR01NS041020 · NINDS · SOUTHERN ILLINOIS UNIVERSITY SCH OF MED · PI ARAI, AMY C · 2001 to 2004
$697k
NICHD NIH HHS P50 HD103525NIMH NIH HHS R01 MH117405NIMH NIH HHS R01 MH127163NINDS NIH HHS R01 NS041020NINDS NIH HHS R01 NS041021
6 · The paper itself

Abstract

A unique signature of neurons is the high expression of the longest genes in the genome. These genes have essential neuronal functions, and disruption of their expression has been implicated in neurological disorders. DNA topoisomerases resolve DNA topological constraints and facilitate neuronal long gene expression. Conversely, the Rett syndrome protein, methyl-CpG-binding protein 2 (MeCP2), can transcriptionally repress long genes. How these factors regulate long genes is not well understood, and whether they interact is not known. Here, we identify and map a functional interaction between MeCP2 and topoisomerase IIβ (TOP2β) in mouse neurons. We profile neuronal TOP2β activity genome wide, detecting enrichment at regulatory regions and gene bodies of long genes, including MeCP2-regulated genes. We show that loss and overexpression of MeCP2 alter TOP2β activity at MeCP2-regulated genes. These findings uncover a mechanism of TOP2β inhibition by MeCP2 in neurons and implicate TOP2β dysregulation in disorders caused by MeCP2 disruption.

Indexed as

Methyl-CpG-Binding Protein 2Rett SyndromeAnimalsMiceNeuronsMecp2 protein, mouseMethyl-CpG-Binding Protein 2brainCP: Neuroscienceenhancergene regulationlong genesMeCP2neurodevelopmental disordersRett syndromeTOP2βtranscription

Identifiers

PMID38096051
PMCPMC10844882
OpenAlexW4389608002

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.