Evidence map›Paper›PMID 38095728›Full record

ArticleParasitology research2023

Genome-wide phylogenetic and genetic evolutionary analyses of mitochondria in Hypoderma bovis and H. sinense on the Qinghai-Tibetan Plateau.

Wangkai Chen, Haining Zhang, Ru Meng, Xueyong Zhang, Hong Duo, Zhihong Guo, Xiuying Shen, Changjiang Chen, Zhi Li, Yong Fu

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Article in Parasitology research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Wangkai ChenQinghai Academy of Animal Sciences and Veterinary Medicine, Qinghai University, Xining, People's Republic of China.
Haining ZhangQinghai Academy of Animal Sciences and Veterinary Medicine, Qinghai University, Xining, People's Republic of China.
Ru MengXining Animal Disease Control Center, Xining, People's Republic of China.
Xueyong ZhangQinghai Academy of Animal Sciences and Veterinary Medicine, Qinghai University, Xining, People's Republic of China.
Hong DuoQinghai Academy of Animal Sciences and Veterinary Medicine, Qinghai University, Xining, People's Republic of China.
Zhihong GuoQinghai Academy of Animal Sciences and Veterinary Medicine, Qinghai University, Xining, People's Republic of China.
Xiuying ShenQinghai Academy of Animal Sciences and Veterinary Medicine, Qinghai University, Xining, People's Republic of China.
Changjiang ChenAnimal Husbandry and Veterinary Station of Huangyuan County, Xining, People's Republic of China.
Zhi LiQinghai Academy of Animal Sciences and Veterinary Medicine, Qinghai University, Xining, People's Republic of China. lizhi19880717@163.com.
Yong FuQinghai Academy of Animal Sciences and Veterinary Medicine, Qinghai University, Xining, People's Republic of China. qhfuyong@163.com.
Qinghai University · CNChina Animal Disease Control Center · CNNational Animal Husbandry Service · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hypoderma bovis (H. bovis) and Hypoderma sinense (H. sinense) are insects that cause hypodermosis in yaks and Bos taurus. Hypodermosis is a severe skin condition that not only impairs the development of local animal husbandry but also poses threats to human health as a zoonosis. The Qinghai-Tibetan Plateau (QTP) is known as the "Roof of the World." Its unique geographical environment and climate conditions have supported the growth of a wide range of mammals, providing favorable conditions for Hypoderma spp. to complete their life cycles. In this study, the whole mitochondrial genomes of H. bovis and H. sinense collected from the QTP were sequenced and phylogenetically analyzed. We found that the whole genomes of H. bovis and H. sinense are 16,283 bp and 16,300 bp in length, respectively. Both the H. bovis and H. sinense genomes have 37 mitochondrial genes, which include two rRNA genes (16S rRNA and 12S rRNA), 22 tRNA genes, the control region (D-loop region), the light chain replication initiation region, and 13 protein-coding genes (PCGs). The phylogenetic tree generated based on the 13 PCGs revealed close phylogenetic relationships between H. sinense, H. bovis, and Hypoderma lineatum. A similar result was also found in our phylogenetic analysis based on 18S rRNA and 28S rRNA. However, analysis of cytochrome oxidase subunit I (COI) showed cluster of H. bovis, H. sinense, and Cuterebra spp. on the same branch, all belonging to Oestridae. The differentiation time generated based on 13 PCGs indicates that H. bovis and H. sinense differentiated and formed ~4.69 million years ago (Mya) and ~4.06 Mya, respectively. This timing coincides with the differentiation and appearance of yak and Bos taurus in the Pliocene (~4.7 Mya), indicating that the parasites and mammals diverged in close temporal proximity. Of note, this period also witnessed a rapid uplift of the QTP, causing significant climate and environmental changes. Thus, we conjecture that the differentiation of Hypoderma spp. is potentially related to the differentiation of their host species, as well as climate changes caused by the uplift of the QTP. Overall, our study can provide valuable data to support further studies on the phylogeny and differentiation of Hypoderma spp. on the QTP.

Indexed as

DipteraAnimalsCattleHumansMammalsMitochondriaPhylogenyRNA, Ribosomal, 16STibetRNA, Ribosomal, 16SDivergence timeH. bovisH. sinensemtDNAPhylogenyQinghai-Tibetan Plateau

Identifiers

PMID38095728
OpenAlexW4389739328

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.