Evidence map›Paper›PMID 38095458›Full record

ArticleJournal of biomolecular structure & dynamics2025

Elaborated pseudoknots that stimulate -1 programmed ribosomal frameshifting or stop codon readthrough in RNA viruses.

Xiaolan Huang, Zhihua Du

Open access · greenAbstract read
In one paragraph

Article in Journal of biomolecular structure & dynamics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. RNAViruses · 2026
    Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Xiaolan HuangSchool of Computing, Southern Illinois University at Carbondale, Carbondale, IL, USA.
Zhihua DuSchool of Chemical and Biomolecular Sciences, Southern Illinois University, Carbondale, IL, USA.
Southern Illinois University Carbondale · USSouthern Illinois University School of Medicine · US

Funding

Structures and Catalytic Mechanisms of Cas13b and Potentially Related Cas9 EndonucleasesR15GM131366 · NIGMS · SOUTHERN ILLINOIS UNIVERSITY CARBONDALE · PI DU, ZHIHUA, HUANG, XIAOLAN · 2018 to 2018
$443k
NIGMS NIH HHS R15 GM131366
6 · The paper itself

Abstract

Pseudoknots assume various functions including stimulation of -1 programmed ribosomal frameshifting (PRF) or stop codon readthrough (SCR) in RNA viruses. These pseudoknots vary greatly in sizes and structural complexities. Recent biochemical and structural studies confirm the three-stemmed pseudoknots as the -1 PRF stimulators in the severe acute respiratory syndrome coronavirus 2 (SARS

Indexed as

Codon, TerminatorFrameshifting, RibosomalNucleic Acid ConformationRNA, ViralRNA VirusesBase SequenceSARS-CoV-2Codon, TerminatorRNA, Viral−1 programmed ribosomal frameshiftingkissing loopspseudoknotsrecodingRNA structureRNA virusesstop codon readthrough

Identifiers

PMID38095458
PMCPMC11176267
OpenAlexW4389732832

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.