Evidence map›Paper›PMID 38095011›Full record

ArticleCurrent opinion in biomedical engineering2023

Protein Engineering Technologies for Development of Next-Generation Genome Editors.

Jackson Winter, Shraddha Shirguppe, Pablo Perez-Pinera

Abstract read
In one paragraph

Article in Current opinion in biomedical engineering, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Embedded CRISPRi Enhances Gene-Silencing Efficiency in Drosophila.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jackson WinterDepartment of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL 61801, United States.
Shraddha ShirguppeDepartment of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL 61801, United States.
Pablo Perez-PineraDepartment of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL 61801, United States.

Funding

Optimization of an in vivo base editing strategy to treat SOD1-linked ALSU01NS122102 · NINDS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI Thomas Gaj, Pablo Perez-Pinera · 2022 to 2026
$5.0M
Development of Technologies for Efficient In Vivo Prime EditingR01GM141296 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI PEREZ-PINERA, PABLO, SONG, JUN S · 2021 to 2024
$2.1M
Development of a CRISPR-Cas13 Gene Therapy for SOD1-Linked ALSR01NS123556 · NINDS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI Thomas Gaj · 2022 to 2026
$1.8M
Engineering platforms for editing RNA with single base resolutionR01GM127497 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI PEREZ-PINERA, PABLO · 2018 to 2021
$1.3M
Advanced Molecular Probes and Cell Engineering Tools for Accurate Single-Molecule Analysis of Signaling in Individual CellsR01GM131272 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI SMITH, ANDREW MICHAEL · 2019 to 2022
$1.1M
NIGMS NIH HHS R01 GM127497NIGMS NIH HHS R01 GM131272NIGMS NIH HHS R01 GM141296NINDS NIH HHS R01 NS123556NINDS NIH HHS U01 NS122102
6 · The paper itself

Abstract

Base editors and prime editors have emerged as promising tools for the modeling and treatment of genetic diseases due to their ability to introduce targeted modifications in the genomic DNA of living cells. Several engineering approaches have been applied to improve their performance, ranging from simple protein design approaches to complex directed evolution schemes that can probe a vast landscape of mutational variants with minimal user intervention. These extensive efforts have led to new generations of editors with enhanced properties such as increased editing activity, tailored editing windows, increased targetability, smaller construct size for viral delivery, and decreased off-target effects. In this manuscript we review protein engineering technologies that have been recently utilized to create an ever-evolving landscape of high-performance gene editing tools specifically designed for genetic targets of interest and that have redefined what is possible in the field of precision medicine.

Indexed as

base editingCRISPR-Cas9directed evolutionGenetic engineeringprime editingprotein engineeringrational design

Identifiers

PMID38095011
PMCPMC10715798

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.