Evidence map›Paper›PMID 38093455›Full record

ArticleJournal of industrial microbiology & biotechnology2023

Discovery and structure elucidation of glycosyl and 5-hydroxy migrastatins from dung beetle gut Kitasatospora sp.

Ji Hyeon Im, Seoyoung Oh, Eun Seo Bae, Soohyun Um, Sang Kook Lee, Yeon Hee Ban, Dong-Chan Oh

Open access · goldAbstract read
In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.5field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ji Hyeon ImN atural Products Research Institute, College of Pharmacy, Seoul National University, Seoul 08826, Republic of Korea.
Seoyoung OhN atural Products Research Institute, College of Pharmacy, Seoul National University, Seoul 08826, Republic of Korea.
Eun Seo BaeN atural Products Research Institute, College of Pharmacy, Seoul National University, Seoul 08826, Republic of Korea.
Soohyun UmN atural Products Research Institute, College of Pharmacy, Seoul National University, Seoul 08826, Republic of Korea.
Sang Kook LeeN atural Products Research Institute, College of Pharmacy, Seoul National University, Seoul 08826, Republic of Korea.
Yeon Hee BanDepartment of Molecular Bioscience, College of Biomedical Science, Kangwon National University, Chuncheon 24341, Republic of Korea.
Dong-Chan OhN atural Products Research Institute, College of Pharmacy, Seoul National University, Seoul 08826, Republic of Korea.ORCID 0000-0001-6405-5535
Seoul National University · KRKangwon National University · KR

Funding

Korea Health Industry Development InstituteMinistry of Health and Welfare HI22C1361Ministry of Science and ICT, South Korea 2021R1A4A2001251National Research Foundation of Korea
6 · The paper itself

Abstract

Two new macrocyclic secondary metabolites, glycosyl-migrastatin (1) and 5-hydroxy-migrastatin (2), were isolated from a gut bacterium Kitasatospora sp. JL24 in dung beetle Onthophagus lenzii. Based on a comprehensive analysis of the nuclear magnetic resonance (NMR), MS, and UV spectroscopic data, the planar structures of 1 and 2 were successfully identified as new derivatives of migrastatin. Compound 1 was the first glycosylated member of the migrastatin family. The absolute configuration of the sugar moiety was determined to be d-glucose through the analysis of coupling constants and ROESY correlations, followed by chemical derivatization and chromatographic comparison with authentic d- and l-glucose. Compound 2, identified as 5-hydroxy-migrastatin possessing an additional hydroxy group with a previously unreported chiral center, was assigned using Mosher's method through 19F NMR chemical shifts and confirmed with the modified Mosher's method. Genomic analysis of Kitasatospora sp. strain JL24 revealed a putative biosynthetic pathway involving an acyltransferase-less type I polyketide synthase biosynthetic gene cluster. ONE-SENTENCE SUMMARY: Two secondary metabolites, glycosyl-migrastatin (1) and 5-hydroxy-migrastatin (2), were discovered from the gut bacterium Kitasatospora sp. JL24 in the dung beetle Onthophagus lenzii.

Indexed as

MacrolidesPiperidonesBacteriaGlucoseMagnetic Resonance SpectroscopyMolecular StructureGlucoseGlucose, (L)-IsomerMacrolidesmigrastatinPiperidonesBiosynthetic pathwayInsect gut bacteriaKitasatospora spMacrocyclic lactoneMigrastatinSecondary metabolites

Identifiers

PMID38093455
PMCPMC10750973
OpenAlexW4389773793

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.