ArticleNature2023
Conserved and divergent gene regulatory programs of the mammalian neocortex.
Erratum issuedOpen access · hybridAbstract readComparative Study
In one paragraph
Article in Nature, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 73 papers.
0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
15.4field-weighted citation impact, top 1% of its field
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
73 citing papers in PubMed, 100 citations in OpenAlex.
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13 more citing papers are in PubMed but not listed here.
Corrections and comments
- Erratum issued
Authors and funding
33 authors at 7 institutions in 1 country.
Nathan R Zemke *Department of Cellular and Molecular Medicine, University of California, San Diego School of Medicine, La Jolla, CA, USA.
Ethan J Armand *Department of Cellular and Molecular Medicine, University of California, San Diego School of Medicine, La Jolla, CA, USA.
Wenliang WangGenomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.
Seoyeon LeeDepartment of Cellular and Molecular Medicine, University of California, San Diego School of Medicine, La Jolla, CA, USA.
Jingtian ZhouBioinformatics and Systems Biology Program, University of California, San Diego, La Jolla, CA, USA.
Yang Eric LiDepartment of Cellular and Molecular Medicine, University of California, San Diego School of Medicine, La Jolla, CA, USA.ORCID 0000-0001-6997-6018
Hanqing LiuGenomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.
Wei TianGenomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.
Joseph R NeryGenomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.ORCID 0000-0003-0153-5659
Rosa G CastanonGenomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.ORCID 0000-0003-1791-002X
Anna BartlettGenomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.ORCID 0000-0001-7059-4033
Julia K OsteenComputational Neurobiology Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.ORCID 0000-0001-7058-3297
Daofeng LiDepartment of Genetics, The Edison Family Center for Genome Sciences & Systems Biology, Washington University School of Medicine, St Louis, MO, USA.ORCID 0000-0001-7492-3703
Xiaoyu ZhuoDepartment of Genetics, The Edison Family Center for Genome Sciences & Systems Biology, Washington University School of Medicine, St Louis, MO, USA.ORCID 0000-0002-1400-5609
Vincent XuDepartment of Genetics, The Edison Family Center for Genome Sciences & Systems Biology, Washington University School of Medicine, St Louis, MO, USA.
Lei ChangDepartment of Cellular and Molecular Medicine, University of California, San Diego School of Medicine, La Jolla, CA, USA.
Keyi DongDepartment of Cellular and Molecular Medicine, University of California, San Diego School of Medicine, La Jolla, CA, USA.
Hannah S IndralingamDepartment of Cellular and Molecular Medicine, University of California, San Diego School of Medicine, La Jolla, CA, USA.
Jonathan A RinkComputational Neurobiology Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.ORCID 0009-0007-4651-0443
Yang XieDepartment of Cellular and Molecular Medicine, University of California, San Diego School of Medicine, La Jolla, CA, USA.ORCID 0000-0002-7453-6786
Michael MillerDepartment of Cellular and Molecular Medicine, University of California, San Diego School of Medicine, La Jolla, CA, USA.ORCID 0000-0003-0781-7868
Fenna M KrienenPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, USA.ORCID 0000-0002-1400-6820
Qiangge ZhangStanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Naz TaskinAllen Institute for Brain Science, Seattle, WA, USA.
Jonathan TingAllen Institute for Brain Science, Seattle, WA, USA.
Guoping FengStanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0002-8021-277X
Steven A McCarrollDepartment of Genetics, Harvard Medical School, Boston, USA.ORCID 0000-0002-6954-8184
Edward M CallawaySystems Neurobiology Laboratories, The Salk Institute for Biological Studies, La Jolla, CA, USA.ORCID 0000-0002-6366-5267
Ting WangDepartment of Genetics, The Edison Family Center for Genome Sciences & Systems Biology, Washington University School of Medicine, St Louis, MO, USA.ORCID 0000-0002-6800-242X
Ed S LeinAllen Institute for Brain Science, Seattle, WA, USA.ORCID 0000-0001-9012-6552
M Margarita BehrensComputational Neurobiology Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA.ORCID 0000-0002-7168-8186
Joseph R EckerGenomic Analysis Laboratory, The Salk Institute for Biological Studies, La Jolla, CA, USA. ecker@salk.edu.ORCID 0000-0001-5799-5895
Bing RenDepartment of Cellular and Molecular Medicine, University of California, San Diego School of Medicine, La Jolla, CA, USA. biren@ucsd.edu.ORCID 0000-0002-5435-1127
Salk Institute for Biological Studies · USUniversity of California San Diego · USAllen Institute for Brain Science · USBroad Institute · USWashington University in St. Louis · USHarvard University · USJames S. McDonnell Foundation · US
Funding
Molecular SignaturesU19MH114831 · NIMH · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI DONG, HONG-WEI · 2017 to 2021
$24.6MCenter for Integrated Multi-modal and Multi-scale Nucleome ResearchUM1HG011585 · NHGRI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DULAC, CATHERINE, LEIN, ED · 2020 to 2024
$6.7MEpigenomic cell-type classification and regulatory element identification in the human brainU01MH121282 · NIMH · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI BEHRENS, M MARGARITA, ECKER, JOSEPH R · 2019 to 2021
$5.4MIllumina NovaSeq 6000 Sequencing SystemS10OD026929 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEPSEN, KRISTEN LYNN · 2019 to 2019
$600kREGULATION OF CORTICAL PHENOTYPE BY BASAL FOREBRAINF30MH011483 · NIMH · UNIVERSITY OF CALIFORNIA IRVINE · PI HA, DUN H · 1997 to 1999
–NHGRI NIH HHS UM1 HG011585NIH HHS S10 OD026929NIMH NIH HHS F30 MH011483NIMH NIH HHS U01 MH121282NIMH NIH HHS U19 MH114831
Abstract
Divergence of cis-regulatory elements drives species-specific traits
Indexed as
Conserved SequenceEvolution, MolecularGene Expression RegulationGene Regulatory NetworksMammalsNeocortexAnimalsCallithrixChromatinDNA MethylationDNA Transposable ElementsEpigenomeGenetic VariationHumansMacacaMiceChromatinDNA Transposable ElementsTranscription Factors
Identifiers
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