Evidence map›Paper›PMID 38092896›Full record

ArticleProtoplasma2024

Transcriptome analysis of Citrus sinensis reveals potential responsive events triggered by Candidatus Liberibacter asiaticus.

Chang Liu, Xiaopeng Chang, Fuxuan Li, Yana Yan, Xiru Zuo, Guiyan Huang, Ruimin Li

Abstract read
PubMed Publisher
In one paragraph

Article in Protoplasma, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
5.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Citrus genomes: past, present and future.Horticulture research · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Chang Liu *College of Life Sciences, Gannan Normal University, Ganzhou, 341000, Jiangxi, China.
Xiaopeng Chang *College of Life Sciences, Gannan Normal University, Ganzhou, 341000, Jiangxi, China.
Fuxuan LiCollege of Life Sciences, Gannan Normal University, Ganzhou, 341000, Jiangxi, China.
Yana YanCollege of Life Sciences, Gannan Normal University, Ganzhou, 341000, Jiangxi, China.
Xiru ZuoCollege of Life Sciences, Gannan Normal University, Ganzhou, 341000, Jiangxi, China.
Guiyan HuangCollege of Life Sciences, Gannan Normal University, Ganzhou, 341000, Jiangxi, China. huangguiyan@gnnu.edu.cn.
Ruimin LiCollege of Life Sciences, Gannan Normal University, Ganzhou, 341000, Jiangxi, China. liruimin@gnnu.edu.cn.ORCID http://orcid.org/0000-0002-3954-6161
Gannan Normal University · CN

Funding

Innovation Fund Designated for Graduate Students of Jiangxi Province YC2022-S928National Natural Science Foundation of China 32160621National Natural Science Foundation of China 32260659
6 · The paper itself

Abstract

Citrus Huanglongbing (HLB), caused by Candidatus Liberibacter asiaticus (CLas), is a devastating immune-mediated disorder that has a detrimental effect on the citrus industry, with the distinguishing feature being an eruption of reactive oxygen species (ROS). This study explored the alterations in antioxidant enzyme activity, transcriptome, and RNA editing events of organelles in C. sinensis during CLas infection. Results indicated that there were fluctuations in the performance of antioxidant enzymes, such as ascorbate peroxidase (APX), catalase (CAT), glutathione reductase (GR), peroxidase (POD), and superoxide dismutase (SOD), in plants affected by HLB. Transcriptome analysis revealed 3604 genes with altered expression patterns between CLas-infected and healthy samples, including those associated with photosynthesis, biotic interactions, and phytohormones. Samples infected with CLas showed a decrease in the expression of most genes associated with photosynthesis and gibberellin metabolism. It was discovered that RNA editing frequency and the expression level of various genes in the chloroplast and mitochondrion genomes were affected by CLas infection. Our findings provide insights into the inhibition of photosynthesis, gibberellin metabolism, and antioxidant enzymes during CLas infection in C. sinensis.

Indexed as

CitrusCitrus sinensisLiberibacterRhizobiaceaeAntioxidantsGene Expression ProfilingGibberellinsPlant DiseasesTranscriptomeAntioxidantsGibberellinsCitrus sinensisGene expressionHuanglongbingPhotosynthesisRNA editing

Identifiers

PMID38092896
OpenAlexW4389668575

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.