Evidence map›Paper›PMID 38092883›Full record

ArticleCommunications biology2023

COVID-19 and influenza infections mediate distinct pulmonary cellular and transcriptomic changes.

Chenxiao Wang, Mst Shamima Khatun, Zhe Zhang, Michaela J Allen, Zheng Chen, Calder R Ellsworth, Joshua M Currey, Guixiang Dai, Di Tian, Konrad Bach and 8 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Translating insights into therapies for Long Covid.Science translational medicine · 2024
    Review
  6. Article
  7. Article
  8. Article
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  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 1 institution in 1 country.

Chenxiao Wang *Tulane National Primate Research Center, Covington, LA, 70433, USA.ORCID 0000-0001-7950-9288
Mst Shamima Khatun *Department of Medicine and Pediatrics, Center for Translational Research in Infection and Inflammation, Tulane University School of Medicine, New Orleans, LA, 70112, USA.
Zhe ZhangDepartment of Pulmonary Critical Care and Environmental Medicine, Tulane University School of Medicine, New Orleans, LA, 70112, USA.ORCID 0009-0000-3689-477X
Michaela J AllenDepartment of Pulmonary Critical Care and Environmental Medicine, Tulane University School of Medicine, New Orleans, LA, 70112, USA.
Zheng ChenTulane National Primate Research Center, Covington, LA, 70433, USA.
Calder R EllsworthTulane National Primate Research Center, Covington, LA, 70433, USA.
Joshua M CurreyTulane National Primate Research Center, Covington, LA, 70433, USA.
Guixiang DaiDepartment of Medicine and Pediatrics, Center for Translational Research in Infection and Inflammation, Tulane University School of Medicine, New Orleans, LA, 70112, USA.
Di TianDepartment of Pathology and Laboratory Medicine, Tulane University School of Medicine, New Orleans, LA, 70112, USA.
Konrad BachDepartment of Pathology and Laboratory Medicine, Tulane University School of Medicine, New Orleans, LA, 70112, USA.
Xiao-Ming YinDepartment of Pathology and Laboratory Medicine, Tulane University School of Medicine, New Orleans, LA, 70112, USA.ORCID 0000-0002-8576-6093
Vicki Traina-DorgeTulane National Primate Research Center, Covington, LA, 70433, USA.
Jay RappaportTulane National Primate Research Center, Covington, LA, 70433, USA.
Nicholas J ManessTulane National Primate Research Center, Covington, LA, 70433, USA.ORCID 0000-0002-9332-7891
Robert V BlairTulane National Primate Research Center, Covington, LA, 70433, USA.ORCID 0000-0001-9616-9414
Jay K KollsDepartment of Medicine and Pediatrics, Center for Translational Research in Infection and Inflammation, Tulane University School of Medicine, New Orleans, LA, 70112, USA.ORCID 0000-0001-5151-6304
Derek A PociaskDepartment of Pulmonary Critical Care and Environmental Medicine, Tulane University School of Medicine, New Orleans, LA, 70112, USA. dpociask@tulane.edu.ORCID 0000-0002-1256-6410
Xuebin QinTulane National Primate Research Center, Covington, LA, 70433, USA. xqin2@tulane.edu.ORCID 0000-0001-9875-983X
Tulane University · US

Funding

Tulane NPRC SPF Sheltered Outdoor Enclosure ExpansionP51OD011104 · OD · TULANE UNIVERSITY OF LOUISIANA · PI L Lee HAMM · 2012 to 2026
$142.4M
Training in CD4 T-cell Lung ImmunityR35HL139930 · NHLBI · TULANE UNIVERSITY OF LOUISIANA · PI KOLLS, JAY K · 2018 to 2024
$6.3M
Role of Complement Activation in Severe COVID-19R01HL165265 · NHLBI · TULANE UNIVERSITY OF LOUISIANA · PI QIN, XUEBIN · 2022 to 2025
$2.9M
Renal Macrophage BiologyR01DK129881 · NIDDK · TULANE UNIVERSITY OF LOUISIANA · PI Xuebin Qin · 2022 to 2026
$2.5M
Impact of Seasonal Variation in Hematocrit, NOx & ET-1 on Vascular ReactivityR21NR010361 · NINR · UNIVERSITY OF MISSOURI-COLUMBIA · PI WIPKE-TEVIS, DEIDRE D · 2008 to 2009
$401k
American Heart Association-American Stroke Association 962950NHLBI NIH HHS R01 HL165265NHLBI NIH HHS R35 HL139930NIDDK NIH HHS R01 DK129881NIH HHS P51 OD011104NINR NIH HHS R21 NR010361
6 · The paper itself

Abstract

SARS-CoV-2 infection can cause persistent respiratory sequelae. However, the underlying mechanisms remain unclear. Here we report that sub-lethally infected K18-human ACE2 mice show patchy pneumonia associated with histiocytic inflammation and collagen deposition at 21 and 45 days post infection (DPI). Transcriptomic analyses revealed that compared to influenza-infected mice, SARS-CoV-2-infected mice had reduced interferon-gamma/alpha responses at 4 DPI and failed to induce keratin 5 (Krt5) at 6 DPI in lung, a marker of nascent pulmonary progenitor cells. Histologically, influenza- but not SARS-CoV-2-infected mice showed extensive Krt5+ "pods" structure co-stained with stem cell markers Trp63/NGFR proliferated in the pulmonary consolidation area at both 7 and 14 DPI, with regression at 21 DPI. These Krt5+ "pods" structures were not observed in the lungs of SARS-CoV-2-infected humans or nonhuman primates. These results suggest that SARS-CoV-2 infection fails to induce nascent Krt5+ cell proliferation in consolidated regions, leading to incomplete repair of the injured lung.

Indexed as

COVID-19Influenza, HumanAnimalsGene Expression ProfilingHumansLungMiceSARS-CoV-2

Identifiers

PMID38092883
PMCPMC10719262
OpenAlexW4389661542

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.