Evidence map›Paper›PMID 38092519›Full record

ReviewGenes & development2023

LINE-1 retrotransposition and its deregulation in cancers: implications for therapeutic opportunities.

Carlos Mendez-Dorantes, Kathleen H Burns

Open access · diamondAbstract readReview
In one paragraph

Review in Genes & development, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 1 synthesis or guideline pooled it, 86 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. LINE-1 Retrotransposons and Amyotrophic Lateral Sclerosis.International journal of molecular sciences · 2026
    Review
  9. Evolution ofInternational journal of molecular sciences · 2026
    Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Carlos Mendez-DorantesDepartment of Pathology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA; kathleenh_burns@dfci.harvard.edu carlos_mendez-dorantes@dfci.harvard.edu.ORCID 0000-0002-8190-8568
Kathleen H BurnsDepartment of Pathology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA; kathleenh_burns@dfci.harvard.edu carlos_mendez-dorantes@dfci.harvard.edu.ORCID 0000-0003-1620-3761
Broad Institute · US

Funding

Consequences of retrotransposition on genome integrityR01CA276112 · NCI · DANA-FARBER CANCER INST · PI KATHLEEN H BURNS, Alice Eunjung Lee · 2023 to 2026
$2.9M
Characterizing the LINE-1 Retrotransposition-Replication ConflictR01CA240816 · NCI · DANA-FARBER CANCER INST · PI BURNS, KATHLEEN H · 2020 to 2024
$2.0M
Single Molecule Detection of L1 Insertions and IntermediatesUG3NS132127 · NINDS · DANA-FARBER CANCER INST · PI BERNSTEIN, BRADLEY EVAN, BURNS, KATHLEEN H · 2023 to 2024
$879k
NCI NIH HHS R01 CA240816NCI NIH HHS R01 CA276112NINDS NIH HHS UG3 NS132127
6 · The paper itself

Abstract

Long interspersed element 1 (LINE-1) is the only protein-coding transposon that is active in humans. LINE-1 propagates in the genome using RNA intermediates via retrotransposition. This activity has resulted in LINE-1 sequences occupying approximately one-fifth of our genome. Although most copies of LINE-1 are immobile, ∼100 copies are retrotransposition-competent. Retrotransposition is normally limited via epigenetic silencing, DNA repair, and other host defense mechanisms. In contrast, LINE-1 overexpression and retrotransposition are hallmarks of cancers. Here, we review mechanisms of LINE-1 regulation and how LINE-1 may promote genetic heterogeneity in tumors. Finally, we discuss therapeutic strategies to exploit LINE-1 biology in cancers.

Indexed as

Long Interspersed Nucleotide ElementsNeoplasmsEpigenesis, GeneticHumansProteinsRNAProteinsRNAepigeneticsgenome instabilityLINE-1 retrotransposons

Identifiers

PMID38092519
PMCPMC10760644
OpenAlexW4389660930

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.