ArticleG3 (Bethesda, Md.)2024
A chromosome-level assembly of the seed beetle Callosobruchus maculatus genome with annotation of its repetitive elements.
Article in G3 (Bethesda, Md.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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Who cites it
6 citing papers in PubMed, 11 citations in OpenAlex.
- Exploring the multigenerational effects of Lippia adoensis (Lamiales: Verbenaceae) essential oil and Dichlorvos on Callosobruchus maculatus (Coleoptera: Bruchidae) life-history traits and gene expression.Journal of insect science (Online) · 2026Article
- Molecular perspectives on life-history evolution in Bruchinae seed beetles.Genetics and molecular biology · 2026Article
- Ecological genomics beyond genome reports.G3 (Bethesda, Md.) · 2025Article
- Life-history adaptation under climate warming magnifies the agricultural footprint of a cosmopolitan insect pest.Nature communications · 2025Article
- Comparative Genomic Analysis of the Pattern of Evolution of Male and Female Reproductive Proteins in Seed Beetles.Genome biology and evolution · 2024Article
- A near-complete genome assembly of Monochamus alternatus a major vector beetle of pinewood nematode.Scientific data · 2024Article
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Authors and funding
10 authors at 3 institutions in 3 countries.
Funding
Abstract
Callosobruchus maculatus is a major agricultural pest of legume crops worldwide and an established model system in ecology and evolution. Yet, current molecular biological resources for this species are limited. Here, we employ Hi-C sequencing to generate a greatly improved genome assembly and we annotate its repetitive elements in a dedicated in-depth effort where we manually curate and classify the most abundant unclassified repeat subfamilies. We present a scaffolded chromosome-level assembly, which is 1.01 Gb in total length with 86% being contained within the 9 autosomes and the X chromosome. Repetitive sequences accounted for 70% of the total assembly. DNA transposons covered 18% of the genome, with the most abundant superfamily being Tc1-Mariner (9.75% of the genome). This new chromosome-level genome assembly of C. maculatus will enable future genetic and evolutionary studies not only of this important species but of beetles more generally.
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