Evidence map›Paper›PMID 38089031›Full record

ArticleFrontiers in public health2023

Distinguishing infectivity in patients with pulmonary tuberculosis using deep learning.

Yi Gao, Yiwen Zhang, Chengguang Hu, Pengyuan He, Jian Fu, Feng Lin, Kehui Liu, Xianxian Fu, Rui Liu, Jiarun Sun and 3 more

Abstract read
In one paragraph

Article in Frontiers in public health, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Revolutionizing diagnosis of pulmonaryFrontiers in microbiology · 2024
    Pooled it
  2. Article
  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yi Gao *Department of Infectious Disease and Hepatology Unit, Nanfang Hospital, Southern Medical University, Guangzhou, China.
Yiwen Zhang *School of Biomedical Engineering, Southern Medical University, Guangzhou, China.
Chengguang HuDepartment of Gastroenterology, Nanfang Hospital, Southern Medical University, Guangzhou, China.
Pengyuan HeDepartment of Infectious Disease, The Fifth Affiliated Hospital, Sun Yat-sen University, Zhuhai, China.
Jian FuDepartment of Infectious Disease, Hainan General Hospital, Hainan Medical University, Haikou, China.
Feng LinDepartment of Infectious Disease, Hainan General Hospital, Hainan Medical University, Haikou, China.
Kehui LiuDepartment of Radiology, Haikou Municipal People's Hospital and Central South University Xiangya Medical College Affiliated Hospital, Haikou, China.
Xianxian FuClinical Lab, Haikou Municipal People's Hospital and Central South University Xiangya Medical College Affiliated Hospital, Haikou, China.
Rui LiuDepartment of Infectious Disease, The Second Affiliated Hospital, Hainan Medical University, Haikou, China.
Jiarun SunDepartment of Infectious Disease and Hepatology Unit, Nanfang Hospital, Southern Medical University, Guangzhou, China.
Feng ChenDepartment of Radiology, Hainan General Hospital, Hainan Medical University, Haikou, China.
Wei YangSchool of Biomedical Engineering, Southern Medical University, Guangzhou, China.
Yuanping ZhouDepartment of Infectious Disease and Hepatology Unit, Nanfang Hospital, Southern Medical University, Guangzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: This study aimed to develop and assess a deep-learning model based on CT images for distinguishing infectivity in patients with pulmonary tuberculosis (PTB). Methods: We labeled all 925 patients from four centers with weak and strong infectivity based on multiple sputum smears within a month for our deep-learning model named TBINet's training. We compared TBINet's performance in identifying infectious patients to that of the conventional 3D ResNet model. For model explainability, we used gradient-weighted class activation mapping (Grad-CAM) technology to identify the site of lesion activation in the CT images. Results: The TBINet model demonstrated superior performance with an area under the curve (AUC) of 0.819 and 0.753 on the validation and external test sets, respectively, compared to existing deep learning methods. Furthermore, using Grad-CAM, we observed that CT images with higher levels of consolidation, voids, upper lobe involvement, and enlarged lymph nodes were more likely to come from patients with highly infectious forms of PTB. Conclusion: Our study proves the feasibility of using CT images to identify the infectivity of PTB patients based on the deep learning method.

Indexed as

Deep LearningTuberculosis, PulmonaryHumansPatientsTechnologyCTdeep learningdisease control and preventioninfectivity identificationpulmonary tuberculosis

Identifiers

PMID38089031
PMCPMC10711219

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.