Evidence map›Paper›PMID 38088549›Full record

ArticleMicrobiology spectrum2024

First trimester "clean catch" urine and vaginal swab sample distinct microbiological niches.

Juliana Sung, Peter Larsen, Thomas M Halverson, Thaddeus P Waters, Jean R Goodman, Alan J Wolfe

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Observational
  2. Review
  3. Review
  4. Urine microbiome in individuals with an impaired immune system.Frontiers in cellular and infection microbiology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Juliana SungDepartment of Obstetrics and Gynecology, Division of Maternal Fetal Medicine, Loyola University Medical Center , Maywood, Illinois, USA.
Peter LarsenLoyola Genomics Facility, Stritch School of Medicine, Loyola University Chicago , Chicago, Illinois, USA.
Thomas M HalversonDepartment of Microbiology and Immunology, Stritch School of Medicine, Loyola University Chicago , Chicago, Illinois, USA.
Thaddeus P WatersDepartment of Obstetrics and Gynecology, Division of Maternal Fetal Medicine, Loyola University Medical Center , Maywood, Illinois, USA.
Jean R GoodmanDepartment of Obstetrics and Gynecology, Division of Maternal Fetal Medicine, Loyola University Medical Center , Maywood, Illinois, USA.
Alan J WolfeLoyola Genomics Facility, Stritch School of Medicine, Loyola University Chicago , Chicago, Illinois, USA.ORCID 0000-0003-4532-0545
Loyola University Chicago · USLoyola University Medical Center · US

Funding

The Female Urinary Microbiome and Urinary IncontinenceR01DK104718 · NIDDK · LOYOLA UNIVERSITY CHICAGO · PI BRUBAKER, LINDA, WOLFE, ALAN J · 2016 to 2020
$3.1M
NIDDK NIH HHS R01 DK104718
6 · The paper itself

Abstract

importanceUntreated asymptomatic bacteriuria (ASB) has been associated with adverse pregnancy outcomes, including pyelonephritis, preterm labor, and low birth weight infants. Thus, routine screening by standard urine culture (SUC) and treatment of ASB are currently recommended for all pregnant women. For this purpose, some researchers claim that vaginal swabs and urine samples can be used as proxies for each other. Because SUC often misses microbes, we used two more sensitive, recently validated detection methods to compare the composition of the urinary and vaginal microbiomes of pregnant females in their first trimester. Both methods yielded similar results. Vaginal and urinary microbial compositions for the same individual were significantly correlated; however, they were not equivalent. We argue that first trimester urinary and vaginal microbiomes are distinct enough to preclude their use as proxies for each other.

Indexed as

BacteriuriaPregnancy Complications, InfectiousPyelonephritisUrinary TractFemaleHumansInfant, NewbornPregnancyPregnancy Trimester, First16S rRNA gene sequencingasymptomatic bacteriuriaclinical microbiologyenhanced culturemicrobiomepregnancy

Identifiers

PMID38088549
PMCPMC10782990
OpenAlexW4389685928

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.