Evidence map›Paper›PMID 38086992›Full record

ArticleCommunications biology2023

Acute irradiation induces a senescence-like chromatin structure in mammalian oocytes.

Claudia Baumann, Xiangyu Zhang, Muthugapatti K Kandasamy, Xiaohan Mei, Shiyou Chen, Kayvan F Tehrani, Luke J Mortensen, Wendy Watford, Ashley Lall, Rabindranath De La Fuente

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Centromere regulation in the germline and early embryo.Current opinion in genetics & development · 2025
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Claudia BaumannDepartment of Physiology and Pharmacology, College of Veterinary Medicine, University of Georgia, Athens, GA, USA.ORCID 0000-0002-4647-0839
Xiangyu ZhangDepartment of Physiology and Pharmacology, College of Veterinary Medicine, University of Georgia, Athens, GA, USA.ORCID 0000-0002-4870-7537
Muthugapatti K KandasamyDepartment of Genetics University of Georgia, Athens, GA, USA.
Xiaohan MeiDepartment of Physiology and Pharmacology, College of Veterinary Medicine, University of Georgia, Athens, GA, USA.
Shiyou ChenDepartment of Physiology and Pharmacology, College of Veterinary Medicine, University of Georgia, Athens, GA, USA.
Kayvan F TehraniRegenerative Biosciences Center (RBC), University of Georgia, Athens, GA, USA.
Luke J MortensenRegenerative Biosciences Center (RBC), University of Georgia, Athens, GA, USA.
Wendy WatfordDepartment of Infectious Diseases, University of Georgia, Athens, GA, USA.
Ashley LallDepartment of Physiology and Pharmacology, College of Veterinary Medicine, University of Georgia, Athens, GA, USA.
Rabindranath De La FuenteDepartment of Physiology and Pharmacology, College of Veterinary Medicine, University of Georgia, Athens, GA, USA. rfuente@uga.edu.ORCID 0000-0001-8473-4113
University of Georgia · USUniversity of Illinois Urbana-Champaign · US

Funding

Role of the DNA Helicase LSH in female meiosisR56HD093383 · NICHD · UNIVERSITY OF GEORGIA · PI DE LA FUENTE, RABINDRANATH · 2018 to 2018
$300k
NICHD NIH HHS R56 HD093383
6 · The paper itself

Abstract

The mechanisms leading to changes in mesoscale chromatin organization during cellular aging are unknown. Here, we used transcriptional activator-like effectors, RNA-seq and superresolution analysis to determine the effects of genotoxic stress on oocyte chromatin structure. Major satellites are organized into tightly packed globular structures that coalesce into chromocenters and dynamically associate with the nucleolus. Acute irradiation significantly enhanced chromocenter mobility in transcriptionally inactive oocytes. In transcriptionally active oocytes, irradiation induced a striking unfolding of satellite chromatin fibers and enhanced the expression of transcripts required for protection from oxidative stress (Fermt1, Smg1), recovery from DNA damage (Tlk2, Rad54l) and regulation of heterochromatin assembly (Zfp296, Ski-oncogene). Non-irradiated, senescent oocytes exhibit not only high chromocenter mobility and satellite distension but also a high frequency of extra chromosomal satellite DNA. Notably, analysis of biological aging using an oocyte-specific RNA clock revealed cellular communication, posttranslational protein modifications, chromatin and histone dynamics as the top cellular processes that are dysregulated in both senescent and irradiated oocytes. Our results indicate that unfolding of heterochromatin fibers following acute genotoxic stress or cellular aging induced the formation of distended satellites and that abnormal chromatin structure together with increased chromocenter mobility leads to chromosome instability in senescent oocytes.

Indexed as

HeterochromatinOocytesAnimalsChromatinChromatin Assembly and DisassemblyHistonesMammalsChromatinHeterochromatinHistones

Identifiers

PMID38086992
PMCPMC10716162
OpenAlexW4389624974

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.