Evidence map›Paper›PMID 38086807›Full record

ArticleNature communications2023

CENP-A and CENP-B collaborate to create an open centromeric chromatin state.

Harsh Nagpal, Ahmad Ali-Ahmad, Yasuhiro Hirano, Wei Cai, Mario Halic, Tatsuo Fukagawa, Nikolina Sekulić, Beat Fierz

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Determinants of centromeric nucleosome conformation.bioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Article
  5. Preserving centromere identity: right amounts of CENP-A at the right place and time.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2025
    Review
  6. Article
  7. CENP-A and centromere evolution in equids.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2025
    Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Review
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  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 4 countries.

Harsh Nagpal *École Polytechnique Fédérale de Lausanne (EPFL), SB ISIC LCBM, Station 6, CH-1015, Lausanne, Switzerland.
Ahmad Ali-Ahmad *Centre for Molecular Medicine Norway (NCMM), Nordic EMBL Partnership, Faculty of Medicine, University of Oslo, Oslo, 0318, Norway.ORCID 0000-0002-9021-5405
Yasuhiro HiranoGraduate School of Frontier Biosciences, Osaka University, Suita, 565-0871, Japan.ORCID 0000-0001-7339-4053
Wei CaiÉcole Polytechnique Fédérale de Lausanne (EPFL), SB ISIC LCBM, Station 6, CH-1015, Lausanne, Switzerland.ORCID 0000-0001-7482-7033
Mario HalicStructural Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105-3678, USA.ORCID 0000-0002-0061-7372
Tatsuo FukagawaGraduate School of Frontier Biosciences, Osaka University, Suita, 565-0871, Japan.ORCID 0000-0001-8564-6852
Nikolina SekulićCentre for Molecular Medicine Norway (NCMM), Nordic EMBL Partnership, Faculty of Medicine, University of Oslo, Oslo, 0318, Norway. nikolina.sekulic@ncmm.uio.no.ORCID 0000-0002-8027-9114
Beat FierzÉcole Polytechnique Fédérale de Lausanne (EPFL), SB ISIC LCBM, Station 6, CH-1015, Lausanne, Switzerland. beat.fierz@epfl.ch.ORCID 0000-0002-2991-3044
École Polytechnique Fédérale de Lausanne · CHThe University of Osaka · JPUniversity of Oslo · NOSt. Jude Children's Research Hospital · US

Funding

Structural and functional studies of chromatin modifiersR01GM135599 · NIGMS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI HALIC, MARIO · 2020 to 2023
$1.5M
NIGMS NIH HHS R01 GM135599
6 · The paper itself

Abstract

Centromeres are epigenetically defined via the presence of the histone H3 variant CENP-A. Contacting CENP-A nucleosomes, the constitutive centromere associated network (CCAN) and the kinetochore assemble, connecting the centromere to spindle microtubules during cell division. The DNA-binding centromeric protein CENP-B is involved in maintaining centromere stability and, together with CENP-A, shapes the centromeric chromatin state. The nanoscale organization of centromeric chromatin is not well understood. Here, we use single-molecule fluorescence and cryoelectron microscopy (cryoEM) to show that CENP-A incorporation establishes a dynamic and open chromatin state. The increased dynamics of CENP-A chromatin create an opening for CENP-B DNA access. In turn, bound CENP-B further opens the chromatin fiber structure and induces nucleosomal DNA unwrapping. Finally, removal of CENP-A increases CENP-B mobility in cells. Together, our studies show that the two centromere-specific proteins collaborate to reshape chromatin structure, enabling the binding of centromeric factors and establishing a centromeric chromatin state.

Indexed as

ChromatinChromosomal Proteins, Non-HistoneAutoantigensCentromereCentromere Protein ACryoelectron MicroscopyDNANucleosomesAutoantigensCentromere Protein AChromatinChromosomal Proteins, Non-HistoneDNANucleosomes

Identifiers

PMID38086807
PMCPMC10716449
OpenAlexW4389625584

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.