Evidence map›Paper›PMID 38085042›Full record

ArticlemSystems2024

Domestication signatures in the non-conventional yeast

Pablo Villarreal, Samuel O'Donnell, Nicolas Agier, Felipe Muñoz-Guzman, Jose Benavides-Parra, Kami Urbina, Tomas A Peña, Mark Solomon, Roberto F Nespolo, Gilles Fischer and 2 more

Abstract read
In one paragraph

Article in mSystems, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Subpopulation-specific gene expression inCurrent research in food science · 2025
    Article
  8. Co-culture dynamics betweenCurrent research in food science · 2025
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Pablo VillarrealDepartamento de Biología, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago, Chile.ORCID 0000-0002-2254-0417
Samuel O'DonnellLaboratory of Computational and Quantitative Biology, CNRS, Institut de Biologie Paris-Seine, Sorbonne Université, Paris, France.ORCID 0000-0003-2447-1993
Nicolas AgierLaboratory of Computational and Quantitative Biology, CNRS, Institut de Biologie Paris-Seine, Sorbonne Université, Paris, France.
Felipe Muñoz-GuzmanDepartamento de Biología, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago, Chile.
Jose Benavides-ParraDepartamento de Biología, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago, Chile.
Kami UrbinaDepartamento de Biología, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago, Chile.
Tomas A PeñaDepartamento de Biología, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago, Chile.
Mark SolomonThe Australian Wine Research Institute, Glen Osmond, Adelaide, SA, Australia.
Roberto F NespoloMillennium Institute for Integrative Biology (iBio), Santiago, Chile.
Gilles FischerLaboratory of Computational and Quantitative Biology, CNRS, Institut de Biologie Paris-Seine, Sorbonne Université, Paris, France.
Cristian VarelaThe Australian Wine Research Institute, Glen Osmond, Adelaide, SA, Australia.
Francisco A CubillosDepartamento de Biología, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago, Chile.ORCID 0000-0003-3022-469X

Funding

Agencia Nacional de Investigación y Desarrollo (ANID) ICN17_022, NCN2021_050, ECOS180003ANID | Fondo Nacional de Desarrollo Científico y Tecnológico (FONDECYT) 1220026, 3200575, 1180917
6 · The paper itself

Abstract

Evaluating domestication signatures beyond model organisms is essential for a thorough understanding of the genotype-phenotype relationship in wild and human-related environments. Structural variations (SVs) can significantly impact phenotypes playing an important role in the physiological adaptation of species to different niches, including during domestication. A detailed characterization of the fitness consequences of these genomic rearrangements, however, is still limited in non-model systems, largely due to the paucity of direct comparisons between domesticated and wild isolates. Here, we used a combination of sequencing strategies to explore major genomic rearrangements in a

Indexed as

Saccharomyces cerevisiaeSaccharomycetalesAlcoholic BeveragesDomesticationHumansTranslocation, Geneticadaptationchromosomal rearrangementsdomesticationLachancea cidristructural variation

Identifiers

PMID38085042
PMCPMC10805023

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.