Evidence map›Paper›PMID 38081837›Full record

ArticleNature communications2023

An archetype and scaling of developmental tissue dynamics across species.

Yoshihiro Morishita, Sang-Woo Lee, Takayuki Suzuki, Hitoshi Yokoyama, Yasuhiro Kamei, Koji Tamura, Aiko Kawasumi-Kita

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Multiple gene knockouts in newts reveal novel functions of 5' Hox genes in limb development along the anterior-posterior and proximal-distal axes.Developmental dynamics : an official publication of the American Association of Anatomists · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 1 country.

Yoshihiro Morishita *Laboratory for Developmental Morphogeometry, RIKEN Center for Biosystems Dynamics Research, Kobe, 650-0047, Japan. yoshihiro.morishita@riken.jp.ORCID 0000-0002-1095-5949
Sang-Woo LeeLaboratory for Developmental Morphogeometry, RIKEN Center for Biosystems Dynamics Research, Kobe, 650-0047, Japan.
Takayuki SuzukiDepartment of Biology, Graduate School of Science, Osaka Metropolitan University, Osaka, 558-8585, Japan.
Hitoshi YokoyamaDepartment of Biochemistry and Molecular Biology, Faculty of Agriculture and Life Science, Hirosaki University, Aomori, 036-8561, Japan.ORCID 0000-0003-4821-9506
Yasuhiro KameiOptics and Bioimaging Facility, Trans-Scale Biology Center, National Institute for Basic Biology, Myodaiji, Okazaki, Aichi, 444-8585, Japan.ORCID 0000-0001-6382-1365
Koji TamuraDepartment of Ecological Developmental Adaptability Life Sciences, Graduate School of Life Sciences, Tohoku University, Sendai, 980-8578, Japan.
Aiko Kawasumi-Kita *Laboratory for Developmental Morphogeometry, RIKEN Center for Biosystems Dynamics Research, Kobe, 650-0047, Japan.
RIKEN Center for Biosystems Dynamics Research · JPHirosaki University · JPJapan Science and Technology Agency · JPNational Institute for Basic Biology · JPOsaka Metropolitan University · JPTohoku University · JP

Funding

MEXT | JST | Core Research for Evolutional Science and Technology (CREST) JPMJCR2025MEXT | JST | Precursory Research for Embryonic Science and Technology (PRESTO) JPMJPR1779MEXT | NINS | National Institute for Basic Biology (NIBB) 16-509MEXT | NINS | National Institute for Basic Biology (NIBB) 16-521
6 · The paper itself

Abstract

Morphometric studies have revealed the existence of simple geometric relationships among various animal shapes. However, we have little knowledge of the mathematical principles behind the morphogenetic dynamics that form the organ/body shapes of different species. Here, we address this issue by focusing on limb morphogenesis in Gallus gallus domesticus (chicken) and Xenopus laevis (African clawed frog). To compare the deformation dynamics between tissues with different sizes/shapes as well as their developmental rates, we introduce a species-specific rescaled spatial coordinate and a common clock necessary for cross-species synchronization of developmental times. We find that tissue dynamics are well conserved across species under this spacetime coordinate system, at least from the early stages of development through the phase when basic digit patterning is established. For this developmental period, we also reveal that the tissue dynamics of both species are mapped with each other through a time-variant linear transformation in real physical space, from which hypotheses on a species-independent archetype of tissue dynamics and morphogenetic scaling are proposed.

Indexed as

OrganogenesisAnimalsMorphogenesisXenopus laevis

Identifiers

PMID38081837
PMCPMC10713982
OpenAlexW4389555785

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.