Evidence map›Paper›PMID 38081640›Full record

ArticleLife science alliance2024

RedRibbon: A new rank-rank hypergeometric overlap for gene and transcript expression signatures.

Anthony Piron, Florian Szymczak, Theodora Papadopoulou, Maria Inês Alvelos, Matthieu Defrance, Tom Lenaerts, Décio L Eizirik, Miriam Cnop

Abstract read
In one paragraph

Article in Life science alliance, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The diabetes-associated KDiabetologia · 2026
    Article
  6. Article
  7. From bats to humans: uncoveringbioRxiv : the preprint server for biology · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Anthony PironULB Center for Diabetes Research, Medical Faculty, Université Libre de Bruxelles, Brussels, Belgium anthony.piron@ulb.be.ORCID https://orcid.org/0000-0002-7931-3784
Florian SzymczakULB Center for Diabetes Research, Medical Faculty, Université Libre de Bruxelles, Brussels, Belgium.
Theodora PapadopoulouULB Center for Diabetes Research, Medical Faculty, Université Libre de Bruxelles, Brussels, Belgium.
Maria Inês AlvelosULB Center for Diabetes Research, Medical Faculty, Université Libre de Bruxelles, Brussels, Belgium.
Matthieu DefranceInteruniversity Institute of Bioinformatics in Brussels (IB2), Brussels, Belgium.
Tom LenaertsInteruniversity Institute of Bioinformatics in Brussels (IB2), Brussels, Belgium.
Décio L EizirikULB Center for Diabetes Research, Medical Faculty, Université Libre de Bruxelles, Brussels, Belgium.
Miriam CnopULB Center for Diabetes Research, Medical Faculty, Université Libre de Bruxelles, Brussels, Belgium miriam.cnop@ulb.be.ORCID https://orcid.org/0000-0002-5112-1692

Funding

The Integrated Stress Response in Human Islets During Early T1DU01DK127786 · NIDDK · UNIVERSITY OF CHICAGO · PI EVANS-MOLINA, CARMELLA, MIRMIRA, RAGHAVENDRA G · 2020 to 2025
$7.1M
NIDDK NIH HHS U01 DK127786
6 · The paper itself

Abstract

High-throughput omics technologies have generated a wealth of large protein, gene, and transcript datasets that have exacerbated the need for new methods to analyse and compare big datasets. Rank-rank hypergeometric overlap is an important threshold-free method to combine and visualize two ranked lists of

Indexed as

AlgorithmsGene Expression ProfilingAlternative SplicingExons

Identifiers

PMID38081640
PMCPMC10709657

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.