Evidence map›Paper›PMID 38081382›Full record

ArticleJournal of molecular biology2024

E. coli RecB Nuclease Domain Regulates RecBCD Helicase Activity but not Single Stranded DNA Translocase Activity.

Nicole T Fazio, Kacey N Mersch, Linxuan Hao, Timothy M Lohman

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

  • Update of
    2023
5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Nicole T FazioDepartment of Biochemistry and Molecular Biophysics, Washington University in St. Louis School of Medicine, St. Louis, MO 63110, United States.
Kacey N MerschDepartment of Biochemistry and Molecular Biophysics, Washington University in St. Louis School of Medicine, St. Louis, MO 63110, United States.
Linxuan HaoDepartment of Biochemistry and Molecular Biophysics, Washington University in St. Louis School of Medicine, St. Louis, MO 63110, United States.
Timothy M LohmanDepartment of Biochemistry and Molecular Biophysics, Washington University in St. Louis School of Medicine, St. Louis, MO 63110, United States. Electronic address: lohman@wustl.edu.
Washington University in St. Louis · US

Funding

Mechanisms of Helicases, Translocases and SSB Proteins involved in Genome MaintenanceR35GM136632 · NIGMS · WASHINGTON UNIVERSITY · PI Timothy M Lohman · 2020 to 2026
$5.5M
Combined single-molecule fluorescence confocal and dual-trap optical tweezersS10OD030315 · OD · WASHINGTON UNIVERSITY · PI SORANNO, ANDREA · 2021 to 2021
$600k
NIGMS NIH HHS R35 GM136632NIH HHS S10 OD030315
6 · The paper itself

Abstract

Much is still unknown about the mechanisms by which helicases unwind duplex DNA. Whereas structure-based models describe DNA unwinding as occurring by the ATPase motors mechanically pulling the DNA duplex across a wedge domain in the helicase, biochemical data show that processive DNA unwinding by E. coli RecBCD helicase can occur in the absence of ssDNA translocation by the canonical RecB and RecD motors. Here we show that DNA unwinding is not a simple consequence of ssDNA translocation by the motors. Using stopped-flow fluorescence approaches, we show that a RecB nuclease domain deletion variant (RecB

Indexed as

DNA HelicasesDNA, Single-StrandedEscherichia coliEscherichia coli ProteinsExodeoxyribonuclease VProtein DomainsDNA HelicasesDNA, Single-StrandedEscherichia coli ProteinsExodeoxyribonuclease Vexodeoxyribonuclease V, E coliallosteryDNA motor regulationrecombinationsingle molecule optical traptransient kinetics

Identifiers

PMID38081382
PMCPMC11131135
OpenAlexW4389505609

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.