Evidence map›Paper›PMID 38078888›Full record

ArticleAging2023

Integration of genomics and transcriptomics highlights the crucial role of chromosome 5 open reading frame 34 in various human malignancies.

Yilin Li, Yong Zhang, Dan Sun, Xiaofeng Zhang, Shangqin Long, Jiuxiang Feng, Zhongmin Wang

Open access · hybridAbstract read
In one paragraph

Article in Aging, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yilin LiDepartment of Gynecology, Dalian Women and Children’s Medical Center (Group), Dalian, China.
Yong ZhangSchool of Clinical Medicine, Fujian Medical University, Department of General Surgery, Ningde Municipal Hospital, Ningde, China.
Dan SunDepartment of Gynecology, Dalian Women and Children’s Medical Center (Group), Dalian, China.
Xiaofeng ZhangSchool of Clinical Medicine, Fujian Medical University, Department of Obstetrics and Gynecology, Ningde Municipal Hospital, Ningde, China.
Shangqin LongDepartment of Obstetrics and Gynecology, Dalian No.3 People’s Hospital, Dalian, China.
Jiuxiang FengDepartment of Gynecology, Dalian Women and Children’s Medical Center (Group), Dalian, China.
Zhongmin WangDepartment of Gynecology, Dalian Women and Children’s Medical Center (Group), Dalian, China.
Fujian Medical University · CNThe Third People's Hospital of Dalian City · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although some data suggest that chromosome 5 open reading frame 34 (C5orf34) plays a pivotal part in the onset and disease progression of various cancers, there is no pan-cancer investigation of C5orf34 at present. This study sought to establish the predictive importance of C5orf34 in a variety of human malignancies and to understand its fundamental immunological function. In our research, we applied a combination of several bioinformatics techniques and basic experiments to investigate the differential expression of C5orf34, and its relationship with prognosis, methylation, single nucleotide variant, clinical characteristics, microsatellite instability, tumor mutational burden, copy number variation, and immune cell infiltration of several cancers from the database that is publicly available with the aim of identifying the potential prognostic markers. In this study we found that C5orf34 expression differed significantly among cancers types, according to the findings. The expression level of C5orf34 is markedly increased in the majority of malignancies when compared to normal tissues, which is significantly correlated with an unfavorable prognosis of patients. Immunohistochemical staining confirmed the findings that C5orf34 expression was remarkably up-regulated in a variety of gynecologic cancers. Moreover, C5orf34 expression was shown to be correlated with the clinical features of patients. C5orf34 was also found to be expressed with genes that code for the major immune suppressors, chemokines, immune activators, chemokine receptors, and histocompatibility complex. Finally, our study shows that C5orf34 has the potential to be employed as a prognostic biomarker. Moreover, it might regulate the immune microenvironment in a variety of malignancies.

Indexed as

Chromosomes, Human, Pair 5Genital Neoplasms, FemaleDNA Copy Number VariationsFemaleGene Expression ProfilingGenomicsHumansIntracellular Signaling Peptides and ProteinsOpen Reading FramesPrognosisTumor MicroenvironmentC5orf34 protein, humanIntracellular Signaling Peptides and ProteinsbiomarkerC5orf34genomicspan-cancertranscriptomics

Identifiers

PMID38078888
PMCPMC10756085
OpenAlexW4389455473

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.