Evidence map›Paper›PMID 38078754›Full record

ArticlemBio2024

Endoplasmic reticulum-associated SARS-CoV-2 ORF3a elicits heightened cytopathic effects despite robust ER-associated degradation.

Jiantao Zhang, Ruth Cruz-Cosme, Chenyu Zhang, Dongxiao Liu, Qiyi Tang, Richard Y Zhao

Open access · goldAbstract read
In one paragraph

Article in mBio, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 19 citations in OpenAlex.

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  15. Effect of Melatonin on Herpesvirus Type 1 Replication.International journal of molecular sciences · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jiantao ZhangDepartment of Pathology, University of Maryland School of Medicine, Baltimore, Maryland, USA.ORCID 0000-0002-2875-9743
Ruth Cruz-CosmeDepartment of Microbiology, Howard University College of Medicine, Washington, DC, USA.
Chenyu ZhangDepartment of Pathology, University of Maryland School of Medicine, Baltimore, Maryland, USA.
Dongxiao LiuDepartment of Microbiology, Howard University College of Medicine, Washington, DC, USA.
Qiyi TangDepartment of Microbiology, Howard University College of Medicine, Washington, DC, USA.ORCID 0000-0002-6487-2356
Richard Y ZhaoDepartment of Pathology, University of Maryland School of Medicine, Baltimore, Maryland, USA.ORCID 0000-0003-3424-2852
Howard University · USUniversity of Maryland, Baltimore · US

Funding

Sleep Disorders in Adults with Sickle Cell Disease: Frequency, Associations with Cardiovascular and Pain Indicators, and Responses to TreatmentU54MD007597 · NIMHD · HOWARD UNIVERSITY · PI Emily M Cramer · 2019 to 2026
$37.7M
PROTEOMICS CORE FACILITYG12MD007597 · NIMHD · HOWARD UNIVERSITY · PI SOUTHERLAND, WILLIAM M. · 2012 to 2018
$14.8M
Molecular Neuro-pathogenesis of Congenital Cytomegalovirus InfectionSC1AI112785 · NIAID · PONCE SCHOOL OF MEDICINE · PI TANG, QIYI · 2014 to 2021
$2.8M
A Novel and High Throughput System for Drug Discovery and Testing on Multidrug Resistant HIV-1 ProteasesR01GM127212 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE · PI ZHAO, RICHARD YUQI · 2017 to 2018
$603k
Rapid Phenotyping of the ZIKV GenomeR21AI129369 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI ZHAO, RICHARD YUQI · 2017 to 2018
$425k
A Novel and High Throughput System for Drug Discovery and Testing on Multidrug Resistant HIV-1 ProteasesR01AI150459 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI ZHAO, RICHARD YUQI · 2019 to 2019
$301k
Viral Protein R (Vpr) in HIV-associated Brain Neuroinflammation and NeurotoxicityI01BX004652 · VA · BALTIMORE VA MEDICAL CENTER · PI J. Marc Simard, RICHARD YUQI ZHAO · 2020 to 2026
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BLRD VA I01 BX004652NIAID NIH HHS R01 AI150459NIAID NIH HHS R21 AI129369NIAID NIH HHS SC1 AI112785NIGMS NIH HHS R01 GM127212NIMHD NIH HHS G12 MD007597NIMHD NIH HHS U54 MD007597
6 · The paper itself

Abstract

importanceThe severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic has tragically claimed millions of lives through coronavirus disease 2019 (COVID-19), and there remains a critical gap in our understanding of the precise molecular mechanisms responsible for the associated fatality. One key viral factor of interest is the SARS-CoV-2 ORF3a protein, which has been identified as a potent inducer of host cellular proinflammatory responses capable of triggering the catastrophic cytokine storm, a primary contributor to COVID-19-related deaths. Moreover, ORF3a, much like the spike protein, exhibits a propensity for frequent mutations, with certain variants linked to the severity of COVID-19. Our previous research unveiled two distinct types of ORF3a mutant proteins, categorized by their subcellular localizations, setting the stage for a comparative investigation into the functional and mechanistic disparities between these two types of ORF3a variants. Given the clinical significance and functional implications of the natural ORF3a mutations, the findings of this study promise to provide invaluable insights into the potential roles undertaken by these mutant ORF3a proteins in the pathogenesis of COVID-19.

Indexed as

COVID-19Endoplasmic ReticulumSARS-CoV-2Viroporin ProteinsCytokine Release SyndromeEndoplasmic Reticulum-Associated DegradationHumansMutant ProteinsMutant ProteinsORF3a protein, SARS-CoV-2Viroporin Proteins26S proteasomeapoptosisautophagyER and lysosomesER-associated degradationER stressNF-kBORF3a mutantsreticulophagySARS-CoV-2TNFα and IL-6TRIM59

Identifiers

PMID38078754
PMCPMC10790703
OpenAlexW4389572223

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.