Evidence map›Paper›PMID 38078294›Full record

ArticleBiodiversity data journal2023

Envisaging a global infrastructure to exploit the potential of digitised collections.

Quentin Groom, Mathias Dillen, Wouter Addink, Arturo H H Ariño, Christian Bölling, Pierre Bonnet, Lorenzo Cecchi, Elizabeth R Ellwood, Rui Figueira, Pierre-Yves Gagnier and 26 more

Abstract read
In one paragraph

Article in Biodiversity data journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors.

Quentin GroomMeise Botanic Garden, Meise, Belgium Meise Botanic Garden Meise Belgium.ORCID https://orcid.org/0000-0002-0596-5376
Mathias DillenMeise Botanic Garden, Meise, Belgium Meise Botanic Garden Meise Belgium.ORCID https://orcid.org/0000-0002-3973-1252
Wouter AddinkNaturalis Biodiversity Center, Leiden, Netherlands Naturalis Biodiversity Center Leiden Netherlands.ORCID https://orcid.org/0000-0002-3090-1761
Arturo H H AriñoUniversity of Navarra, Pamplona, Spain University of Navarra Pamplona Spain.ORCID https://orcid.org/0000-0003-4620-6445
Christian BöllingMuseum für Naturkunde Berlin, Berlin, Germany Museum für Naturkunde Berlin Berlin Germany.
Pierre BonnetUMR AMAP, CIRAD, Montpellier, France UMR AMAP, CIRAD Montpellier France.ORCID https://orcid.org/0000-0002-2828-4389
Lorenzo CecchiSezione di Botanica Filippo Parlatore, Museo di Storia Naturale, Università di Firenze, Via G. La Pira 4, 50121 Firenze, Italy Sezione di Botanica Filippo Parlatore, Museo di Storia Naturale, Università di Firenze, Via G. La Pira 4 50121 Firenze Italy.
Elizabeth R EllwoodiDigBio, Gainesville, United States of America iDigBio Gainesville United States of America.ORCID https://orcid.org/0000-0003-1602-1917
Rui FigueiraCIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Vairão, Portugal CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Vairão Portugal.ORCID https://orcid.org/0000-0002-8351-4028
Pierre-Yves GagnierMuséum national d'histoire naturelle, Paris, France Muséum national d'histoire naturelle Paris France.ORCID https://orcid.org/0000-0002-7104-898X
Olwen M GraceRoyal Botanic Garden Edinburgh, Edinburgh, United Kingdom Royal Botanic Garden Edinburgh Edinburgh United Kingdom.
Anton GüntschFreie Universität Berlin, Botanic Garden and Botanical Museum Berlin, Berlin, Germany Freie Universität Berlin, Botanic Garden and Botanical Museum Berlin Berlin Germany.
Helen HardyNatural History Museum, London, United Kingdom Natural History Museum London United Kingdom.ORCID https://orcid.org/0000-0002-9206-8357
Pieter HuybrechtsResearch Institute for Nature and Forest (INBO), Brussels, Belgium Research Institute for Nature and Forest (INBO) Brussels Belgium.ORCID https://orcid.org/0000-0002-6658-6062
Roger HyamRoyal Botanic Garden Edinburgh, Edinburgh, United Kingdom Royal Botanic Garden Edinburgh Edinburgh United Kingdom.ORCID https://orcid.org/0000-0003-4581-1379
Alexis A J JolyINRIA, Montpellier, France INRIA Montpellier France.
Vamsi Krishna KommineniFriedrich Schiller University Jena, Jena, Germany Friedrich Schiller University Jena Jena Germany.ORCID https://orcid.org/0000-0001-6168-3085
Isabel LarridonRoyal Botanic Gardens, Kew, Richmond, England, United Kingdom Royal Botanic Gardens, Kew Richmond, England United Kingdom.ORCID https://orcid.org/0000-0003-0285-722X
Laurence LivermoreThe Natural History Museum, London, United Kingdom The Natural History Museum London United Kingdom.ORCID https://orcid.org/0000-0002-7341-1842
Ricardo Jorge LopesCIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Vairão, Portugal CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado Vairão Portugal.ORCID https://orcid.org/0000-0003-2193-5107
Sofie MeeusMeise Botanic Garden, Meise, Belgium Meise Botanic Garden Meise Belgium.ORCID https://orcid.org/0000-0003-0715-8647
Jeremy A MillerNaturalis Biodiversity Center, Leiden, Netherlands Naturalis Biodiversity Center Leiden Netherlands.ORCID https://orcid.org/0000-0001-8918-9775
Kenzo MillevilleGhent University, Ghent, Belgium Ghent University Ghent Belgium.ORCID https://orcid.org/0000-0002-9765-6000
Renato PandaCi2, Polytechnic Institute of Tomar, Tomar, Portugal Ci2, Polytechnic Institute of Tomar Tomar Portugal.ORCID https://orcid.org/0000-0003-2539-5590
Marc PignalMNHN, Paris, France, Metropolitan MNHN Paris France, Metropolitan.ORCID https://orcid.org/0000-0002-6772-9299
Jorrit PoelenRonin Institute, Montclair, NJ, United States of America Ronin Institute Montclair, NJ United States of America.ORCID https://orcid.org/0000-0003-3138-4118
Blagoj RistevskiFaculty of Information and Communication Technologies- Bitola, University "St. Kliment Ohridski", Bitola, Macedonia Faculty of Information and Communication Technologies- Bitola, University "St. Kliment Ohridski" Bitola Macedonia.ORCID https://orcid.org/0000-0002-8356-1203
Tim RobertsonGlobal Biodiversity Information Facility, Copenhagen, Denmark Global Biodiversity Information Facility Copenhagen Denmark.ORCID https://orcid.org/0000-0001-6215-3617
Ana C RufinoCentre for Functional Ecology, Department of Life Sciences, University of Coimbra, Coimbra, Portugal Centre for Functional Ecology, Department of Life Sciences, University of Coimbra Coimbra Portugal.ORCID https://orcid.org/0000-0002-8496-1399
Joaquim SantosCentre for Functional Ecology, Department of Life Sciences, University of Coimbra, Coimbra, Portugal Centre for Functional Ecology, Department of Life Sciences, University of Coimbra Coimbra Portugal.ORCID https://orcid.org/0000-0002-2160-4968
Maarten SchermerUtrecht University, Utrecht, Netherlands Utrecht University Utrecht Netherlands.ORCID https://orcid.org/0000-0001-6770-3155
Ben ScottNatural History Museum, London, United Kingdom Natural History Museum London United Kingdom.ORCID https://orcid.org/0000-0002-5590-7174
Katja Chantre SeltmannCheadle Center for Biodiversity and Ecological Restoration, University of California Santa Barbara, Santa Barbara, United States of America Cheadle Center for Biodiversity and Ecological Restoration, University of California Santa Barbara Santa Barbara United States of America.ORCID https://orcid.org/0000-0001-5354-6048
Heliana TeixeiraCESAM & Department of Biology, University of Aveiro, Aveiro, Portugal CESAM & Department of Biology, University of Aveiro Aveiro Portugal.ORCID https://orcid.org/0000-0001-8525-9967
Maarten TrekelsMeise Botanic Garden, Meise, Belgium Meise Botanic Garden Meise Belgium.ORCID https://orcid.org/0000-0001-8282-8765
Jitendra GaikwadFriedrich Schiller University Jena, Jena, Germany Friedrich Schiller University Jena Jena Germany.ORCID https://orcid.org/0000-0002-7565-4389

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tens of millions of images from biological collections have become available online over the last two decades. In parallel, there has been a dramatic increase in the capabilities of image analysis technologies, especially those involving machine learning and computer vision. While image analysis has become mainstream in consumer applications, it is still used only on an artisanal basis in the biological collections community, largely because the image corpora are dispersed. Yet, there is massive untapped potential for novel applications and research if images of collection objects could be made accessible in a single corpus. In this paper, we make the case for infrastructure that could support image analysis of collection objects. We show that such infrastructure is entirely feasible and well worth investing in.

Indexed as

biodiversitycomputer visionfunctional traitsmachine learningspecies identificationspecimens

Identifiers

PMID38078294
PMCPMC10704481

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.