Evidence map›Paper›PMID 38077502›Full record

ArticleJournal of biomedical optics2024

Machine learning based local recurrence prediction in colorectal cancer using polarized light imaging.

Anamitra Majumdar, Jigar Lad, Kseniia Tumanova, Stefano Serra, Fayez Quereshy, Mohammadali Khorasani, Alex Vitkin

Open access · goldAbstract read
In one paragraph

Article in Journal of biomedical optics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Anamitra MajumdarUniversity of Toronto, Department of Medical Biophysics, Toronto, Ontario, Canada.ORCID 0000-0002-1859-9854
Jigar LadMcMaster University, Department of Physics and Astronomy, Hamilton, Ontario, Canada.
Kseniia TumanovaUniversity of Toronto, Department of Medical Biophysics, Toronto, Ontario, Canada.
Stefano SerraUniversity of Toronto, Department of Laboratory Medicine and Pathobiology, Toronto, Ontario, Canada.
Fayez QuereshyUniversity of Toronto, Department of Laboratory Medicine and Pathobiology, Toronto, Ontario, Canada.
Mohammadali KhorasaniUniversity of British Columbia, Department of Surgery, Victoria, British Columbia, Canada.
Alex VitkinUniversity of Toronto, Department of Medical Biophysics, Toronto, Ontario, Canada.
University of Toronto · CAMcMaster University · CAUniversity of British Columbia · CA

Funding

CIHR
6 · The paper itself

Abstract

Significance: Current treatment for stage III colorectal cancer (CRC) patients involves surgery that may not be sufficient in many cases, requiring additional adjuvant systemic therapy. Identification of this latter cohort that is likely to recur following surgery is key to better personalized therapy selection, but there is a lack of proper quantitative assessment tools for potential clinical adoption. Aim: The purpose of this study is to employ Mueller matrix (MM) polarized light microscopy in combination with supervised machine learning (ML) to quantitatively analyze the prognostic value of peri-tumoral collagen in CRC in relation to 5-year local recurrence (LR). Approach: A simple MM microscope setup was used to image surgical resection samples acquired from stage III CRC patients. Various potential biomarkers of LR were derived from MM elements via decomposition and transformation operations. These were used as features by different supervised ML models to distinguish samples from patients that locally recurred 5 years later from those that did not. Results: Using the top five most prognostic polarimetric biomarkers ranked by their relevant feature importances, the best-performing XGBoost model achieved a patient-level accuracy of 86%. When the patient pool was further stratified, 96% accuracy was achieved within a tumor-stage-III sub-cohort. Conclusions: ML-aided polarimetric analysis of collagenous stroma may provide prognostic value toward improving the clinical management of CRC patients.

Indexed as

Colorectal NeoplasmsMachine LearningBiomarkersCombined Modality TherapyHumansPrognosisBiomarkersartificial intelligencecancer prognosisMueller matrix microscopyoutcome predictionpolarimetrysupervised machine learning

Identifiers

PMID38077502
PMCPMC10704263
OpenAlexW4388929818

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.