Evidence map›Paper›PMID 38076923›Full record

ArticlebioRxiv : the preprint server for biology2023

Y and Mitochondrial Chromosomes in the Heterogeneous Stock Rat Population.

Faith Okamoto, Apurva S Chitre, Thiago Missfeldt Sanches, Denghui Chen, Daniel Munro, NIDA Center for GWAS in Outbred Rats, Oksana Polesskaya, Abraham A Palmer

Open access · greenAbstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Faith OkamotoDepartment of Psychiatry, University of California San Diego, 9500 Gilman Dr, La Jolla, CA 92093.ORCID 0009-0007-4163-6928
Apurva S ChitreBioinformatics and System Biology Program, University of California San Diego, 9500 Gilman Dr, La Jolla, CA 92093.ORCID 0000-0003-1709-9214
Thiago Missfeldt SanchesDepartment of Psychiatry, University of California San Diego, 9500 Gilman Dr, La Jolla, CA 92093.ORCID 0000-0001-6962-9569
Denghui ChenBioinformatics and System Biology Program, University of California San Diego, 9500 Gilman Dr, La Jolla, CA 92093.ORCID 0000-0002-6541-3418
Daniel MunroDepartment of Psychiatry, University of California San Diego, 9500 Gilman Dr, La Jolla, CA 92093.ORCID 0000-0002-0724-218X
NIDA Center for GWAS in Outbred Rats
Oksana PolesskayaDepartment of Psychiatry, University of California San Diego, 9500 Gilman Dr, La Jolla, CA 92093.ORCID 0000-0003-3024-114X
Abraham A PalmerDepartment of Psychiatry, University of California San Diego, 9500 Gilman Dr, La Jolla, CA 92093.ORCID 0000-0003-3634-0747
University of California San Diego · US

Funding

Sequencing CoreP50DA037844 · NIDA · UNIVERSITY OF CHICAGO · PI PALMER, ABRAHAM A · 2014 to 2023
$27.4M
NIDA NIH HHS P50 DA037844
6 · The paper itself

Abstract

Genome-wide association studies typically evaluate the autosomes and sometimes the X Chromosome, but seldom consider the Y or mitochondrial Chromosomes. We genotyped the Y and mitochondrial chromosomes in heterogeneous stock rats (

Indexed as

Differential expressionHaplotypeHeterogeneous stock ratsLow-coverage sequencingMitochondrial ChromosomeOutbredPheWASRatRNA-seqY Chromosome

Identifiers

PMID38076923
PMCPMC10705385
OpenAlexW4389202373

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.