Evidence map›Paper›PMID 38076867›Full record

ArticlebioRxiv : the preprint server for biology2023

Competition for shared resources increases dependence on initial population size during coalescence of gut microbial communities.

Doran A Goldman, Katherine S Xue, Autumn B Parrott, Rashi R Jeeda, Lauryn R Franzese, Jaime G Lopez, Jean C C Vila, Dmitri A Petrov, Benjamin H Good, David A Relman and 1 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Doran A GoldmanDepartment of Biology, Stanford University, Stanford, CA 94305, USA.ORCID 0009-0001-7838-5209
Katherine S XueDepartment of Biology, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0002-4094-3615
Autumn B ParrottDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0002-2226-5515
Rashi R JeedaDepartment of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.ORCID 0009-0002-7228-026X
Lauryn R FranzeseDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA.
Jaime G LopezDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0003-1647-5898
Jean C C VilaDepartment of Biology, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0003-0499-0200
Dmitri A PetrovDepartment of Biology, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0002-3664-9130
Benjamin H GoodDepartment of Biology, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0002-7757-3347
David A RelmanDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305, USA.ORCID 0000-0001-8331-1354
Kerwyn Casey HuangDepartment of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA 94305, USA.ORCID 0000-0002-8043-8138

Funding

Genomics of rapid adaptation in the lab and in the wildR35GM118165 · NIGMS · STANFORD UNIVERSITY · PI Dmitri Petrov · 2016 to 2026
$8.3M
A universal pipeline for functional characterization of the human microbiota at a massive scaleRM1GM135102 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BUIE, CULLEN RICHARD, DEUTSCHBAUER, ADAM M · 2020 to 2024
$7.6M
Antimicrobial Resistance and Horizontal Gene Transfer in the Human Gut Microbiome in Response to an AntibioticR01AI147023 · NIAID · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI RELMAN, DAVID A. · 2020 to 2024
$3.5M
Household transmission of the human gut microbiota after antibiotic exposureR21AI168860 · NIAID · STANFORD UNIVERSITY · PI RELMAN, DAVID A. · 2023 to 2024
$426k
NIAID NIH HHS R01 AI147023NIAID NIH HHS R21 AI168860NIGMS NIH HHS R35 GM118165NIGMS NIH HHS RM1 GM135102
6 · The paper itself

Abstract

The long-term success of introduced populations depends on their initial size and ability to compete against existing residents, but it remains unclear how these factors collectively shape colonization. Here, we investigate how initial population (propagule) size and resource competition interact during community coalescence by systematically mixing eight pairs of

Identifiers

PMID38076867
PMCPMC10705444

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.