Evidence map›Paper›PMID 38075896›Full record

ArticleFrontiers in microbiology2023

Raman-dielectrophoresis goes viral: towards a rapid and label-free platform for plant virus characterization.

Alessio Sacco, Giulia Barzan, Slavica Matić, Andrea M Giovannozzi, Andrea M Rossi, Chiara D'Errico, Marta Vallino, Marina Ciuffo, Emanuela Noris, Chiara Portesi

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Alessio Sacco *Quantum Metrology and Nano Technologies Division, National Institute of Metrological Research (INRiM), Torino, Italy.
Giulia Barzan *Quantum Metrology and Nano Technologies Division, National Institute of Metrological Research (INRiM), Torino, Italy.
Slavica Matić *Institute for Sustainable Plant Protection, National Research Council of Italy (CNR), Torino, Italy.
Andrea M GiovannozziQuantum Metrology and Nano Technologies Division, National Institute of Metrological Research (INRiM), Torino, Italy.
Andrea M RossiQuantum Metrology and Nano Technologies Division, National Institute of Metrological Research (INRiM), Torino, Italy.
Chiara D'ErricoInstitute for Sustainable Plant Protection, National Research Council of Italy (CNR), Torino, Italy.
Marta VallinoInstitute for Sustainable Plant Protection, National Research Council of Italy (CNR), Torino, Italy.
Marina CiuffoInstitute for Sustainable Plant Protection, National Research Council of Italy (CNR), Torino, Italy.
Emanuela NorisInstitute for Sustainable Plant Protection, National Research Council of Italy (CNR), Torino, Italy.
Chiara PortesiQuantum Metrology and Nano Technologies Division, National Institute of Metrological Research (INRiM), Torino, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An innovative spectroscopic method that allows to chemically and structurally characterize viruses directly in suspension within few minutes was developed. A library of five different plant viruses was obtained combining dielectrophoresis (DEP), performed with a device specifically designed to capture and agglomerate virus particles, and Raman spectroscopy to provide a chemical fingerprint of virions. The tested viruses, purified from infected plants, were chosen for their economic impact on horticultural crops and for their different morphological and structural features. Using the Raman-DEP device, specific profiles for each virus were successfully obtained, relying on chemical differences occurring even with genetically similar viruses belonging to the same taxonomic species and morphologically indiscernible by transmission electron microscopy (TEM). Moreover, we investigated the potentiality of Raman-DEP to follow dynamic changes occurring upon heat treatment of tobacco mosaic virus (TMV) particles. Raman peak deviations linked to TMV coat protein conformation were observed upon treatment at temperatures equal or higher than 85°C, substantiating the rod-to-spherical shape transitions observed by TEM and the concomitant drastic loss of infectivity following plant inoculation. Overall, the Raman-DEP method can be useful for the characterization of virus (nano)particles, setting the basis to create a database suitable for the study of viruses or virus derived-nanoparticles relevant for the agricultural, medical, or biotechnological fields.

Indexed as

dielectrophoresisplant virusesRaman spectroscopyTMVvirus-derived nanoparticles

Identifiers

PMID38075896
PMCPMC10699305

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.