Evidence map›Paper›PMID 38074793›Full record

ArticleRadiology. Artificial intelligence2023

Domain-adapted Large Language Models for Classifying Nuclear Medicine Reports.

Zachary Huemann, Changhee Lee, Junjie Hu, Steve Y Cho, Tyler J Bradshaw

Abstract read
In one paragraph

Article in Radiology. Artificial intelligence, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Large Language Models and Large Multimodal Models in Medical Imaging: A Primer for Physicians.Journal of nuclear medicine : official publication, Society of Nuclear Medicine · 2025
    Review
  14. Uncertainty-aware automatic TNM staging classification for [BMC medical informatics and decision making · 2024
    Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Zachary HuemannFrom the Departments of Radiology (Z.H., C.L., S.Y.C., T.J.B.), Biostatistics (J.H.), and Computer Science (J.H.), University of Wisconsin-Madison, 1111 Highland Ave, Madison, WI 53705; and University of Wisconsin Carbone Cancer Center, Madison, Wis (S.Y.C.).ORCID https://orcid.org/0000-0002-1472-243X
Changhee LeeFrom the Departments of Radiology (Z.H., C.L., S.Y.C., T.J.B.), Biostatistics (J.H.), and Computer Science (J.H.), University of Wisconsin-Madison, 1111 Highland Ave, Madison, WI 53705; and University of Wisconsin Carbone Cancer Center, Madison, Wis (S.Y.C.).
Junjie HuFrom the Departments of Radiology (Z.H., C.L., S.Y.C., T.J.B.), Biostatistics (J.H.), and Computer Science (J.H.), University of Wisconsin-Madison, 1111 Highland Ave, Madison, WI 53705; and University of Wisconsin Carbone Cancer Center, Madison, Wis (S.Y.C.).ORCID 0000-0001-7137-7719
Steve Y ChoFrom the Departments of Radiology (Z.H., C.L., S.Y.C., T.J.B.), Biostatistics (J.H.), and Computer Science (J.H.), University of Wisconsin-Madison, 1111 Highland Ave, Madison, WI 53705; and University of Wisconsin Carbone Cancer Center, Madison, Wis (S.Y.C.).
Tyler J BradshawFrom the Departments of Radiology (Z.H., C.L., S.Y.C., T.J.B.), Biostatistics (J.H.), and Computer Science (J.H.), University of Wisconsin-Madison, 1111 Highland Ave, Madison, WI 53705; and University of Wisconsin Carbone Cancer Center, Madison, Wis (S.Y.C.).ORCID 0000-0001-9549-7002

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: To evaluate the impact of domain adaptation on the performance of language models in predicting five-point Deauville scores on the basis of clinical fluorine 18 fluorodeoxyglucose PET/CT reports. Materials and Methods: The authors retrospectively retrieved 4542 text reports and images for fluorodeoxyglucose PET/CT lymphoma examinations from 2008 to 2018 in the University of Wisconsin-Madison institutional clinical imaging database. Of these total reports, 1664 had Deauville scores that were extracted from the reports and served as training labels. The bidirectional encoder representations from transformers (BERT) model and initialized BERT models BioClinicalBERT, RadBERT, and RoBERTa were adapted to the nuclear medicine domain by pretraining using masked language modeling. These domain-adapted models were then compared with the non-domain-adapted versions on the task of five-point Deauville score prediction. The language models were compared against vision models, multimodal vision-language models, and a nuclear medicine physician, with sevenfold Monte Carlo cross-validation. Means and SDs for accuracy are reported, with Results: Domain adaptation improved the performance of all language models ( Conclusion: Domain adaptation improved the performance of large language models in predicting Deauville scores in PET/CT reports.

Indexed as

Artificial IntelligenceConvolutional Neural Network (CNN)DeauvilleLanguage ModelingLymphomaMachine LearningMultimodal LearningNatural Language ProcessingNuclear MedicinePETPET/CTTransfer LearningUnsupervised Learning

Identifiers

PMID38074793
PMCPMC10698610

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.