Evidence map›Paper›PMID 38073510›Full record

ArticleEmerging microbes & infections2024

Structural diversity of tick-borne encephalitis virus particles in the inactivated vaccine based on strain Sofjin.

Andrey Moiseenko, Yichen Zhang, Mikhail F Vorovitch, Alla L Ivanova, Zheng Liu, Dmitry I Osolodkin, Alexey M Egorov, Aydar A Ishmukhametov, Olga S Sokolova

Abstract read
In one paragraph

Article in Emerging microbes & infections, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Andrey MoiseenkoFaculty of Biology, Lomonosov Moscow State University, Moscow, Russia.ORCID 0000-0003-1112-2356
Yichen ZhangFaculty of Biology, Shenzhen MSU-BIT University, Shenzhen, People's Republic of China.ORCID 0009-0005-6969-4527
Mikhail F VorovitchFSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), Moscow, Russia.
Alla L IvanovaFSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), Moscow, Russia.
Zheng LiuKobilka Institute of Innovative Drug Discovery, School of Medicine, Chinese University of Hong Kong, Shenzhen, People's Republic of China.ORCID 0000-0002-3538-9349
Dmitry I OsolodkinFSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), Moscow, Russia.ORCID 0000-0002-0462-2945
Alexey M EgorovFSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), Moscow, Russia.
Aydar A IshmukhametovFSASI "Chumakov FSC R&D IBP RAS" (Institute of Poliomyelitis), Moscow, Russia.ORCID 0000-0001-6130-4145
Olga S SokolovaFaculty of Biology, Lomonosov Moscow State University, Moscow, Russia.ORCID 0000-0003-4678-232X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The main approach to preventing tick-borne encephalitis (TBE) is vaccination. Formaldehyde-inactivated TBE vaccines have a proven record of safety and efficiency but have never been characterized structurally with atomic resolution. We report a cryoelectron microscopy (cryo-EM) structure of the formaldehyde-inactivated TBE virus (TBEV) of Sofjin-Chumakov strain representing the Far-Eastern subtype. A 3.8 Å resolution reconstruction reveals the structural integrity of the envelope E proteins, specifically the E protein ectodomains. The comparative study shows a high structural similarity to the previously published structures of the TBEV European subtype strains Hypr and Kuutsalo-14. A fraction of inactivated virions exhibits asymmetric features including the deformations of the membrane profile. We propose that the heterogeneity is caused by inactivation and perform a local variability analysis on the small parts of the envelope protein shell to reveal membrane curvature features possibly induced by the inactivation. The results of this study will have implications for the design of novel vaccines against diseases caused by flaviviruses.

Indexed as

Encephalitis, Tick-BorneEncephalitis Viruses, Tick-BorneViral VaccinesCryoelectron MicroscopyFormaldehydeHumansVaccines, InactivatedFormaldehydeVaccines, InactivatedViral Vaccinesasymmetrycryoelectron microscopyimage analysisinactivated vaccinesTick-borne encephalitis virusvariability analysis

Identifiers

PMID38073510
PMCPMC10930090

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.