Evidence map›Paper›PMID 38072409›Full record

ArticleMicrobes and environments2023

Effects of Co-existing Heterotrophs on Physiology of and Nitrogen Metabolism in Autotrophic Nitrite-oxidizing Candidatus Nitrotoga.

Hiroto Ide, Kento Ishii, Yu Takahashi, Hirotsugu Fujitani, Satoshi Tsuneda

Open access · diamondAbstract read
In one paragraph

Article in Microbes and environments, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 67% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Hiroto IdeDepartment of Life Science and Medical Bioscience, Waseda University.
Kento IshiiDepartment of Life Science and Medical Bioscience, Waseda University.
Yu TakahashiDepartment of Life Science and Medical Bioscience, Waseda University.
Hirotsugu FujitaniResearch Organization for Nano & Life Innovation, Waseda University.
Satoshi TsunedaDepartment of Life Science and Medical Bioscience, Waseda University.
Waseda University · JPChuo University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interactions between autotrophic nitrifiers and heterotrophs have attracted considerable attention in microbial ecology. However, the mechanisms by which heterotrophs affect the physiological activity of and nitrogen metabolism in autotrophic nitrite oxidizers remain unclear. We herein focused on nitrite-oxidizing Candidatus Nitrotoga and compared an axenic culture including only Ca. Nitrotoga with a co-culture of both Ca. Nitrotoga and Acidovorax in physiological experiments and transcriptomics. In the co-culture with Acidovorax, nitrite consumption by Ca. Nitrotoga was promoted, and some genes relevant to nitrogen metabolism in Ca. Nitrotoga were highly expressed. These results provide insights into the mechanisms by which co-existing heterotrophs affect autotrophic nitrifiers.

Indexed as

GallionellaceaeNitritesNitrogenOxidation-ReductionNitritesNitrogenco-culturegrowthinteractionnitrite-oxidizing bacteriatranscriptome

Identifiers

PMID38072409
PMCPMC10728634
OpenAlexW4389495376

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.